Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1886 116 4e-21 seq1467 105 6e-18 >seq1886 Length=76891 Score = 116 bits (128), Expect = 4e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||||| |||||||| ||||| |||||||| || || || ||| |||||||| Sbjct 23613 ATGTAGAGTGGACTCCTTCTGGATATTGTAGTCCGACAGAGTCCTGCCGTCTTCGAGCTG 23554 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||||||| | || | ||||||||||| || ||||||||||||||||| |||||| Sbjct 23553 CTTGCCCGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGGATCTT 23494 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | | || | || |||| | |||||| || | ||||| ||| |||||||| Sbjct 23493 CGACTTAACGTTGTCGATAGTATCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCGGT 23434 Query 133637 CA 133638 || Sbjct 23433 CA 23432 Score = 113 bits (124), Expect = 4e-20 Identities = 146/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||||||||| || || |||||| || ||| | | | ||||| |||||||||| Sbjct 23835 GGTGGACTCTTTCTGAATGTTATAATCGGACAGGGTGCGGCCA-TCCTCAAGCTGCTTGC 23777 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||| ||||| |||||||| || |||||||| |||||| || Sbjct 23776 CAGCGAAGATCAGACGCTGTTGGTCTGGAGGGATACCCTCCTTGTCCTGGATCTTCGACT 23717 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | || || | | ||| || || | || | ||| || ||||| || | Sbjct 23716 TGACATTGTCGATAGTATCCGATGACTCGACCTCAAGAGTAATGGTCTTTCCGGTGAGTG 23657 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 23656 TCTTGACGAAGATCTGCAT 23638 Score = 100 bits (110), Expect = 3e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| |||||||||||||| | ||||| ||||| || || || || |||||||||||| Sbjct 24020 TCCTCAAGCTGCTTGCCCGCAAAGATGAGACGCTGTTGATCCGGGGGAATGCCTTCCTTG 23961 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||| | | |||| || || | | || || |||| |||| | Sbjct 23960 TCCTGGATCTTAGACTTCACATTATCAATAGTATCCGACGATTCGACTTCGAGAGTGATG 23901 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || ||||| || || || |||||||||||||| Sbjct 23900 GTCTTTCCGGTGAGCGTCTTAACGAAAATCTGCAT 23866 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGA 133512 ||||| | || ||||| || || || ||||| ||| | || || || ||||| | Sbjct 24299 AAATGGAGAGTTGACTCCTTTTGGATGTTGTAGTCGGAAAGTGTTCGGCCG--TCCTCCA 24242 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 ||||||||| ||| |||| || ||||| || || ||||| ||||| ||||| || | Sbjct 24241 ACTGCTTGCCGGCGAAAATCAGACGCTGTTGATCCGGAGGAATGCCCTCCTTATCCTGAA 24182 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 |||| ||||| | |||| || || | | || || || | || | |||||||| Sbjct 24181 TCTTAGACTTGACGTTGTCAATAGTATCTGAAGATTCAACTTCCAAAGTAATGGTTTTGC 24122 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| ||||| || ||||| || ||||| Sbjct 24121 CGGTTAGAGTCTTGACGAATATTTGCAT 24094 >seq1467 Length=78481 Score = 105 bits (116), Expect = 6e-18 Identities = 195/286 (68%), Gaps = 0/286 (0%) Strand=Plus/Minus Query 149472 TAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGA 149531 || ||||| ||||||||||| ||||||| | || ||||| ||| |||| || | | Sbjct 49103 TAAATGCCTTCGATGCTGTCTTCCTTCATGTCAATGAGGAAGCATGAGGACATCTGTGCA 49044 Query 149532 AAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATC 149591 | |||||||||| ||| | ||||| || || ||||| ||||| | | ||| Sbjct 49043 GAGGGCGTGCCGGCATTGAATAGTGTGGGCGAAGCATGAGTAAAGTATTTGTTGGACATA 48984 Query 149592 ATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGC 149651 ||||||| ||| || | || || || |||||||| ||||| | ||| || ||| Sbjct 48983 TAATCGTACGTCTCTAGTGCTTTCTCAATATCTTCGCCATGAATGCCAACGGCAACACGC 48924 Query 149652 ATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTT 149711 || ||||| ||||| |||||||| || ||| | ||| || | || | Sbjct 48923 ATGAGCATGTGCTGTGGTCGCTCAGCAGTCTTGCCGTCGATTCGTAGGAGATATGATCGT 48864 Query 149712 TCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGT 149757 || ||||||||| | |||||| | | ||||| ||||| ||| ||| Sbjct 48863 TCAAGTGTCTTGAATCCAAAGAATTGGTAGTTGAAGTCTCGGTCGT 48818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483404303265200