Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1467 95.1 1e-14 seq1886 93.3 4e-14 >seq1467 Length=78481 Score = 95.1 bits (104), Expect = 1e-14 Identities = 342/526 (65%), Gaps = 13/526 (2%) Strand=Plus/Minus Query 147889 TCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGG 147945 || |||||||| || || | ||||| ||| | ||||| ||||| || |||||| Sbjct 49328 TCAGCGTGCCATGGCTCGAGGTAGATGGCAAAGGCACCGGGCCGCTTATTCCCACCCTGG 49269 Query 147946 TCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTG 148005 || |||| ||| | ||||||| | || || | ||| ||| |||||| ||| || Sbjct 49268 TCAACATAGCGAGCAGTGTTGTTGTAGACTCGTAACATTGGTATTAGGCCGTTCGATGTA 49209 Query 148006 CCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATG 148065 ||||| || | || | || || || | ||| ||||| | ||||| Sbjct 49208 CCGTTCGTTCCACCAATATATGAACCAGTAGCACGAATGCGGTGGACGTTTAGACCAATA 49149 Query 148066 CCGCCGCCGTACTTTGATATGGCAGCGCAATCGCC--CAATGTCGTGTAGATGCCGTCGA 148123 ||||| || || || || || ||| || || ||| || ||||| |||| Sbjct 49148 CCGCCAGCGGTTTTGGAGAT--CATGGCACACGTTTTCAGTGTGTCATAAATGCCTTCGA 49091 Query 148124 TGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCG 148183 ||||||| | || | | ||| | || || || |||| || | | |||| || | Sbjct 49090 TGCTGTCTTCCTTCATGTCAATGAGGAAGCATGAGGACATCTGTGCAGAGGGCGTGCCGG 49031 Query 148184 CCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTT--GACTCATCATGCGATACGT 148241 | ||| || ||||| || || ||||| |||| | ||| || || || ||||| Sbjct 49030 CATTGAATAGTGTGGGCGAAGCATGAGTAAAGTATTTGTTGGACATATAAT-CG-TACGT 48973 Query 148242 CTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTG 148301 ||| | || | || || || ||||| |||||||| | || || |||||||||||||| Sbjct 48972 CTCTAGTGCTTTCTCAATATCTTCGCCATGAATGCCAACGGCAACACGCATGAGCATGTG 48913 Query 148302 CTGTGGTCGTTCGGCA-ACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTT 148360 ||||||||| || ||| |||| || ||| || |||||| ||| || || | Sbjct 48912 CTGTGGTCGCTCAGCAGTCTTG-CCGTCGATTCGTAGGAGATATGATCGTTCAAGTGTCT 48854 Query 148361 TGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGC 148406 || | |||||| | | ||| | || ||| | |||||| | || || Sbjct 48853 TGAATCCAAAGAATTGGTAGTTGAAGTCTCGGTCGTAAACTATAGC 48808 Score = 86.0 bits (94), Expect = 6e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 147459 GGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTC 147518 ||| | |||||| ||||| ||||| ||| || |||| | |||||| | || || Sbjct 49810 GGCAAGAGACGCAAGATTACAGACAGCCACTTCGTCGGGTGCTGTGTACTCGATAATCTC 49751 Query 147519 GGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCA 147578 | ||| || ||| || || ||||| ||| | ||| ||||| ||||||||||| Sbjct 49750 TGTGCAAAGATTGGAGCTGCGAATAGTTCCCAGATTCTTCTGGTTGCTCTTCCGATTGCA 49691 Query 147579 CGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCG 147615 ||||||||| |||||||||| || |||||||||| Sbjct 49690 GGCGTCTTTGTAGAGCATGTATGGGTTGCCGGTCTCG 49654 >seq1886 Length=76891 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || |||||||||||||||||| | || || ||| || ||||| || || | | Sbjct 24059 GATTCCTTTTGAATGTTGTAGTCGGAGAGCGTTCGGCCATCCTCAAGCTGCTTGCCCGCA 24000 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||||||||| || || |||||||| || || || || |||| Sbjct 23999 AAGATGAGACGCTGTTGATCCGGGGGAATGCCTTCCTTGTCCTGGATCTTAGACTTCACA 23940 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | |||||| | || || ||||||| || | || || || || || || || Sbjct 23939 TTATCAATAGTATCCGACGATTCGACTTCGAGAGTGATGGTCTTTCCGGTGAGCGTCTTA 23880 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 23879 ACGAAAATCTGCAT 23866 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | ||||||| ||||| |||||||||||| | || || || || Sbjct 24302 ACCAAATGGAGAGTTGACTCCTTTTGGATGTTGTAGTCGGAAAGTGTTCGGCCGTCCTCC 24243 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 | ||| || |||| | || |||||||||||||| ||||| ||||| || ||||| | Sbjct 24242 AACTGCTTGCCGGCGAAAATCAGACGCTGTTGATCCGGAGGAATGCCCTCCTTATCCTGA 24183 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || || | | || | |||||| | | || ||||| | || | ||||| Sbjct 24182 ATCTTAGACTTGACGTTGTCAATAGTATCTGAAGATTCAACTTCCAAAGTAATGGTTTTG 24123 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || ||||| || | ||| || ||||| Sbjct 24122 CCGGTTAGAGTCTTGACGAATATTTGCAT 24094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476594935642800