Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1467 91.5 2e-12 seq1023 91.5 2e-12 >seq1467 Length=78481 Score = 91.5 bits (100), Expect = 2e-12 Identities = 105/138 (76%), Gaps = 4/138 (3%) Strand=Plus/Plus Query 262097 TGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAAGGAC 262156 |||| |||||| ||| |||||| | ||||||||||| || |||||| ||||||| ||| Sbjct 49628 TGGTACGCCATTCTCGAGGCCCAAACCGAGACCGGCAACCCATACATGCTCTACAAAGAC 49687 Query 262157 GCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACAGAGGCCAACCTGT 262214 ||| ||| | || ||||||||| |||| ||||| || | || ||| |||| || | Sbjct 49688 GCCTGCAATCGGAAGAGCAACCAGAAGAATCTGGGAACTATTCG-CAG-CTCCAATCTTT 49745 Query 262215 GCACCGAGATCGTCCAGT 262232 |||| ||||| || ||| Sbjct 49746 GCACAGAGATTATCGAGT 49763 Score = 86.0 bits (94), Expect = 9e-11 Identities = 175/260 (67%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 259923 CGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGG 259982 ||||||| || || |||||||||||||| | |||| || || ||||| || | | Sbjct 49013 CGCCCACACTATTCAATGCCGGCACGCCCTCTGCACAGATGTCCTCATGCTTCCTCATTG 49072 Query 259983 ACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCT 260042 ||||||||| || ||||| ||||| |||||||| || || ||| || | |||| Sbjct 49073 ACATGAAGGAAGACAGCATCGAAGGCATTTATGACACACTGAAAACGTGTGCCATGATCT 49132 Query 260043 CCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACG 260102 |||| | || ||||| || ||| | || ||| | || || | || | || Sbjct 49133 CCAAAACCGCTGGCGGTATTGGTCTAAACGTCCACCGCATTCGTGCTACTGGTTCATATA 49192 Query 260103 TGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACA 260162 | | || || ||||| || |||||||| | || ||| | || || | ||| ||| Sbjct 49193 TTGGTGGAACGAACGGTACATCGAACGGCCTAATACCAATGTTACGAGTCTACAACAACA 49252 Query 260163 CGGCGCGCTACGTCGACCAG 260182 | || ||||| || |||||| Sbjct 49253 CTGCTCGCTATGTTGACCAG 49272 >seq1023 Length=12933 Score = 91.5 bits (100), Expect = 2e-12 Identities = 199/294 (68%), Gaps = 17/294 (6%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || ||||| || || ||||| ||||||||||| || | || | Sbjct 6653 GATCTGGCAGATGTAC-AAGAAGGCAGAAGCATCCTTCTGGACCGCCGAAGAAATTGATC 6711 Query 1455835 TCGGCGCCGA----CACGGTCCACTGG-----GTGTCGCTGAGCGACGACGAGCGCCATT 1455885 | | || |||| ||||| | ||| | | | ||||||||||| | Sbjct 6712 TATCCAAAGATCTTCACG----ACTGGAACAAGCGTCTC--AACAACGACGAGCGCTTCT 6765 Query 1455886 TCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTG 1455945 | || ||||||||||| || || ||| || ||||| ||||| |||||| || Sbjct 6766 TTATTTCCCACGTCCTCGCATTCTT-CGCAGCATCAGATGGTATCGTCAATGAGAACTTG 6824 Query 1455946 GCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAG 1456005 | | || || | || || ||| | ||||| || || | ||||| || |||||| Sbjct 6825 GTTGAGCGATTCAGCGGCGAAGTACAAGTACCAGAAGCGCGATGCTTTTATGGCTTCCAG 6884 Query 1456006 ATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTAC 1456059 ||| || || ||||||||||| || || ||||| || |||| ||||||||| Sbjct 6885 ATCATGATGGAGAACATCCACTCGGAGACATACTCCCTGTTGATTGACACCTAC 6938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177547886482260