Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1886 132 5e-26 seq1467 114 1e-20 >seq1886 Length=76891 Score = 132 bits (146), Expect = 5e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || || || |||||||| |||||||||||| || || | ||| || | ||| Sbjct 24296 TGGAGAGTTGACTCCTTTTGGATGTTGTAGTCGGAAAGTGTTCGGCCGTCCTCCAACTGC 24237 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 ||||| || ||||||| |||||| ||||| || || ||||| || || || ||||| || Sbjct 24236 TTGCCGGCGAAAATCAGACGCTGTTGATCCGGAGGAATGCCCTCCTTATCCTGAATCTTA 24177 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 ||||| ||| | || || || ||||| || || | |||||||||||| |||||| Sbjct 24176 GACTTGACGTTGTCAATAGTATCTGAAGATTCAACTTCCAAAGTAATGGTTTTGCCGGTT 24117 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 | ||| || ||||| |||||||| Sbjct 24116 AGAGTCTTGACGAATATTTGCAT 24094 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| | ||| || || |||||||||||||||||||||||| Sbjct 24092 CCACCACGGAGACGGAGCACCAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCGGAG 24033 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || || ||||| ||||| ||||| || | |||||| ||||| || || Sbjct 24032 AGCGTTCGGCCATCCTCAAGCTGCTTGCCCGCAAAGATGAGACGCTGTTGATCCGGGGGA 23973 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || || || || || || | || || |||||||| || Sbjct 23972 ATGCCTTCCTTGTCCTGGATCTTAGACTTCACATTATCAATAGTATCCGACGATTCGACT 23913 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||||||| ||||| || ||||| | || ||||||||||| ||||| Sbjct 23912 TCGAGAGTGATGGTCTTTCCGGTGAGCGTCTTAACGAAAATCTGCAT 23866 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || ||||| || || |||||||| || ||| | |||| | || || Sbjct 23846 ACAAGGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGACAGGGTGCGGCCATCCTCA 23787 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| || || |||| |||||| || || || || || || || || || || Sbjct 23786 AGCTGCTTGCCAGCGAAGATCAGACGCTGTTGGTCTGGAGGGATACCCTCCTTGTCCTGG 23727 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | || || || || || || || ||||||||||| || Sbjct 23726 ATCTTCGACTTGACATTGTCGATAGTATCCGATGACTCGACCTCAAGAGTAATGGTCTTT 23667 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| | || || ||||| || ||||| Sbjct 23666 CCGGTGAGTGTCTTGACGAAGATCTGCAT 23638 >seq1467 Length=78481 Score = 114 bits (126), Expect = 1e-20 Identities = 295/447 (66%), Gaps = 3/447 (1%) Strand=Plus/Plus Query 7536 AATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGGGCAT 7595 |||| ||||| | || || ||| || |||||||| |||| || || || ||||| Sbjct 48882 AATCGACGGCAAGACTGCTGAGCGACCACAGCACATGCTCATGCGTGTTGCCGTTGGCAT 48941 Query 7596 TCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAACAGTT 7655 ||| |||||||| ||||| || | || |||||| | ||||| ||| | || Sbjct 48942 TCATGGCGAAGATATTGAGAAAGCACTAGAGACGTACGATTATATGTCCAACAAATACTT 49001 Query 7656 TACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCAATTGTCCTCGTG 7715 ||| || ||||||||||| | || || ||||| | | | || ||||||| || Sbjct 49002 TACTCATGCTTCGCCCACACTATTCAATGCCGGCACGCCCTCTGCACAGATGTCCTCATG 49061 Query 7716 TTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGCGATTG 7775 || | | |||| |||||||||||||| |||||||| |||| ||| || Sbjct 49062 CTTCCTCATTGACATGAAGGAAGACAGCATCGAAGGCATTTATGACACACTGAAAACGTG 49121 Query 7776 CGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGACGTGCGCGCCAA 7835 |||| || |||||| || ||||| || ||||| ||||| || | | || || | Sbjct 49122 TGCCATGATCTCCAAAACCGCTGGCGGTATTGGTCTAAACGTCCACCGCATTCGTGCTAC 49181 Query 7836 CGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGT 7895 ||| || | || ||||| | | | | ||| || || ||||| || || Sbjct 49182 TGGTTCATATATTGGTGGAACGAACGGTACATCGAACGGCCTAATACCAATGTTACGAGT 49241 Query 7896 GTTCAATAACGCGGTGCGACATGTAGACCAGGG-GGGA--AAGCGCAAAGGCGCCGCTGC 7952 | ||| ||| | | || |||| |||||||| |||| ||||| || ||| ||| Sbjct 49242 CTACAACAACACTGCTCGCTATGTTGACCAGGGTGGGAATAAGCGGCCCGGTGCCTTTGC 49301 Query 7953 CATCTATTTGGAGCCGTGGCACGCGGA 7979 |||||| | ||||| |||||||| || Sbjct 49302 CATCTACCTCGAGCCATGGCACGCTGA 49328 Score = 105 bits (116), Expect = 7e-18 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 8232 CGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTG 8291 ||||||| |||| |||| ||| ||||| | || |||||||| ||||||||||| || Sbjct 49633 CGCCATTCTCGAGGCCCAAACCGAGACCGGCAACCCATACATGCTCTACAAAGACGCCTG 49692 Query 8292 CAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGA 8351 ||| || ||||| || | || |||| || ||| | || |||||| ||| | || Sbjct 49693 CAATCGGAAGAGCAACCAGAAGAATCTGGGAACTATTCGCAGCTCCAATCTTTGCACAGA 49752 Query 8352 AATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTC 8402 ||| | |||||| || |||||||||||||| || || ||||| ||||| Sbjct 49753 GATTATCGAGTACACAGCACCCGACGAAGTGGCTGTCTGTAATCTTGCGTC 49803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505381153279600