Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq185 134 1e-26 >seq185 Length=46918 Score = 134 bits (148), Expect = 1e-26 Identities = 339/510 (66%), Gaps = 14/510 (3%) Strand=Plus/Plus Query 19337 AACATGTTCGTGGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGA 19396 |||| || ||||| | | || || || ||||| || ||||||||||||||||| Sbjct 40486 AACACGTGCGTGGTATCCTACTGTACGGACCACCAGGGACGGGAAAAACATTAATTGCAC 40545 Query 19397 GAGAACTTAGTAAATTACTTA---CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAA 19453 || || || | ||| | |||| | | | ||||| ||| || | || ||||| ||| Sbjct 40546 GACAAATTGGCAAAATGCTTAACGCCAGAGAACCT---AAAGTTATTAACGGTCCGGAAG 40602 Query 19454 TCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTG 19513 | | || ||||| ||||| || |||||||||||| |||| | ||||| || || | Sbjct 40603 TGCTCAACAAATACGTAGGACAGTCGGAAGAAAATATACGGAAGCTCTTTGCGGATGCCG 40662 Query 19514 AAGAAGAACAAAAACGTTTAGGGCG-CAAAAGTTCTTTGCACATTATAATACTAGATGAA 19572 || ||| | | || | | || | | | ||| || || ||||| || | |||||| Sbjct 40663 AA-AAGGAGTACAAGGAAAAAGGTGACGAGAGTGGCTTACATATTATTATCTTCGATGAA 40721 Query 19573 TTGGACGCAATCTGTAAGCAAAGAGGTTCT---GGTGTA---AATGGAGTACATGACACT 19626 | || || | |||||||||||||| || |||| | | ||||| |||| | Sbjct 40722 CTTGATGCTGTGTGTAAGCAAAGAGGCACTAGTGGTGGAGGCACGGGAGTCGGAGACAGT 40781 Query 19627 GTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTT 19686 || ||||| || || || || ||| | ||||| || | || |||||||| || | | Sbjct 40782 GTGGTCAACCAGCTGCTCTCCAAACTTGACGGAGTGGATCAGCTGAATAACATCCTTCTC 40841 Query 19687 ATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTG 19746 ||||||||||| ||| | |||| | || || ||| | | || || ||||| | Sbjct 40842 ATTGGCATGACCAATCGGATGGACATGATTGATGAGGCCCTTCTCCGTCCAGGTCGTCTA 40901 Query 19747 GAAATAAAGATCGAAATTAACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACATA 19806 ||| | | || |||||| | | |||||||| | || || | |||| | || || Sbjct 40902 GAAGTTCACATGGAAATTTCCCTTCCCGATGAGTCAGGTCGGGCACAAATCCTCAAGATT 40961 Query 19807 CATACATCAACCATGCGACAAAATAACCTT 19836 ||||| | | |||||| | || ||| || Sbjct 40962 CATACTGCCAAGATGCGAAACAACAACGTT 40991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397442775893650