Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1467 138 1e-27 seq1023 102 1e-16 >seq1467 Length=78481 Score = 138 bits (152), Expect = 1e-27 Identities = 422/646 (65%), Gaps = 15/646 (2%) Strand=Plus/Minus Query 111511 ACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCAT 111570 ||| || || | || || |||||||| | ||| |||| || ||| || |||||||| Sbjct 49482 ACCAGGAGCTTCGTTAGGGCAGAAAAGTGTCCAGCTACCATTTTGCTCGACTCGCTTCAT 49423 Query 111571 GAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACC 111630 |||||| ||||||||||||| || | ||||| |||| ||| |||| || | || Sbjct 49422 GAAAAGATCTGGAATCCACAAGGCGTAGAAGAGGTCTCGGGCACGAACCTCCTCCTTGCC 49363 Query 111631 TTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGAC 111690 || || ||| | ||||| || | || ||| |||||||||||||| || |||| Sbjct 49362 GTGATTCTTTCGGAGATCAAGAAAACTGAAGACATCAGCGTGCCATGGCTCGAGGTAGAT 49303 Query 111691 TGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAA 111747 || | | || || | |||| | || | |||||||| || ||| ||| | Sbjct 49302 GGCAAAGGCACCGGGCCGCTTATTCCCACCCTGGTCAACATAGCGAGCAGTGTTGTTGTA 49243 Query 111748 TACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTT 111807 || || | |||||| || | || | ||| ||| || || || | |||| || Sbjct 49242 GACTCGTAACATTGGTATTAGGCCGTTCGATGTACCGTTCGTTCCACCAATATATGAACC 49183 Query 111808 ATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGC 111867 | | || | | |||| || | |||||||| ||||| || ||||| || Sbjct 49182 AGTAGCACGAATGCGGTGGACGTTTAGACCAATACCGCCAGCGGTTTTGGAGATCATGGC 49123 Query 111868 ACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAA 111927 |||| | || || |||| || || | ||| ||| ||||| || | || ||||| Sbjct 49122 ACACGTTTTCAGTGTGTCATAAATGCCTTCGATGCTGTCTTCCTTCATGTCAATGAGGAA 49063 Query 111928 GCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAAT 111987 ||| ||||||||| | || || || |||||||| || || || | || ||| | Sbjct 49062 GCATGAGGACATCTGTGCAGAGGGCGTGCCGGCATTGAATAGTGTGGGCGAAGCATGAGT 49003 Query 111988 GAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGT 112046 || || | | |||||| | ||||| ||||| | | ||||| ||||| || | Sbjct 49002 -AAAGTATTTGTTGGACATATAATCGTACGTCTCTAGTGCTTTCTCAATATCTTCGCCAT 48944 Query 112047 GGATGCCGATTGCGACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGA----TGCCA 112102 | ||||| | || || ||||||| ||||| |||||| || | || | |||| Sbjct 48943 GAATGCCAACGGCAACACGCATGAGCATGTGCTGTGG----TCGCTCAGCAGTCTTGCCG 48888 Query 112103 TCGAGCCGTTGAAGATA-GCTCTTCTCAAGGGTTTTGAGACCAAAG 112147 |||| ||| | ||||| | || | ||||| || |||| |||||| Sbjct 48887 TCGATTCGTAGGAGATATGATCGT-TCAAGTGTCTTGAATCCAAAG 48843 Score = 100 bits (110), Expect = 4e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 || ||||| | || || | ||| || |||||| || || |||||||||| | | Sbjct 49815 GGGAGGGCAAGAGACGCAAGATTACAGACAGCCACTTCGTCGGGTGCTGTGTACTCGATA 49756 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || ||||| || | ||||| || ||| || |||| |||||| ||||| |||||| Sbjct 49755 ATCTCTGTGCAAAGATTGGAGCTGCGAATAGTTCCCAGATTCTTCTGGTTGCTCTTCCGA 49696 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 ||||| || || |||||||||||||| || | || ||||| || || | | |||||| Sbjct 49695 TTGCAGGCGTCTTTGTAGAGCATGTATGGGTTGCCGGTCTCGGTTTGGGCCTCGAGAATG 49636 Query 111410 GCCTTCCAAA 111419 || | ||||| Sbjct 49635 GCGTACCAAA 49626 >seq1023 Length=12933 Score = 102 bits (112), Expect = 1e-16 Identities = 284/425 (67%), Gaps = 18/425 (4%) Strand=Plus/Minus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 ||||| || || |||||||| |||||||| ||||| || || ||||| ||||| Sbjct 7548 TAGTCACCAACGCGCTTCTCGAAGAAGTTTGTCTTGCCTGACAGAGAGATGTTCTCCATG 7489 Query 122431 AAGTCAAATGGATTCTTCGCGT-----TCCAAATGGGTGGCACCCCAACTTGTTTGAGG- 122484 |||||||| || || | |||| | | | | || ||||| || || | Sbjct 7488 AAGTCAAACGGGTTTGTTGCGTGATAGTACTTCTTGTTG----CCCAA--TGCCAGAAGC 7435 Query 122485 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGA-TGAG 122543 | ||| || | ||| |||| ||||||| | ||||| | |||||||| || | | | Sbjct 7434 AAACGGTCAGCAACAAACTCGATGTACTGGCACATCAGTTTGGAGTTCATGCCAAGTAAT 7375 Query 122544 GTTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGAT 122603 | || ||| | |||||| | |||| | | |||||| |||||||||| | | ||| Sbjct 7374 GCGAC-TGGCAATGCGTCTGTAAGGAACTCCTGCTCAATTGTAACCGCCTCTGTGATGAT 7316 Query 122604 GGCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTT-GAAGAGCTCCACGGCAA 122662 ||| | | | | | | | |||| | | | | || |||||| ||| | Sbjct 7315 GGCTTCCACCGCCTTAGGACTTGGTCGACT-CTTGATGTGAGAGAAGAGAAGGCAGGCGA 7257 Query 122663 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCA 122722 | || ||| | ||||||||| || || || ||||| || |||||| || ||| |||| Sbjct 7256 AGTCGGTGTGCATACCCTCATCGCGCGAGATGAGTTCGTTCGAGAAGGTTAAACCAGGCA 7197 Query 122723 TGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCC 122781 |||| || |||||||| | ||| |||| | ||| ||| || ||| ||||||||||||| Sbjct 7196 TGAGTCCGCGCTTCTTAAGCCAGAAAATGGACGC-GAAAGATCCGCTGAAGAAGATACCC 7138 Query 122782 TCCAC 122786 || || Sbjct 7137 TCGAC 7133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628010568408000