Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1467 136 5e-27 >seq1467 Length=78481 Score = 136 bits (150), Expect = 5e-27 Identities = 577/912 (63%), Gaps = 61/912 (7%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| ||||| ||||||| || ||| | || |||||||| ||||| ||||| | Sbjct 48907 CCACAGCACATGCTCATGCGTGTTGCCGTTGGCATTCATGGCGAAGATATTGAGAAAGCA 48966 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| ||||| | |||||| | | || || | ||| || | || || || || Sbjct 48967 CTAGAGACGTACGATTATATGTCCAACAAATACTTT-ACTCATGCTTCGCCCACACTATT 49025 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 |||||| || || || | || |||||| |||||||| || | || ||||| || Sbjct 49026 CAATGCCGGCACGCCCTCTGCACAGATGTCCTCATGCTTCCTCATTGACATGAAGGAAGA 49085 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 | ||| | || || |||| || || | |||||| ||||| || ||||| Sbjct 49086 CAGCATCGAAGGCATTTATGACACACTGAAAACGTGTGCCATGATCTCCAAAACCGCTGG 49145 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 |||||||| | || |||| | | || | | || |||| | || || || Sbjct 49146 CGGTATTGGTCTAAACGTCCACCGCATTCGTGCTACTGGTTCATATATTGGTGGAACGAA 49205 Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580 ||| ||| | || | || |||||| | || || | ||| ||| || |||||||| Sbjct 49206 CGGTACATCGAACGGCCTAATACCAATGTTACGAGTCTACAACAACACTGCTCGCTATGT 49265 Query 104581 AAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGC 104637 | || | |||| | || || | | || |||| || |||||||||||||| Sbjct 49266 TGACCAGGGTGGGAATAAGCGGCCCGGTGCCTTTGCCATCTACCTCGAGCCATGGCACGC 49325 Query 104638 GGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCG 104697 ||| || | || ||||| | || || || || | ||||||| || ||| Sbjct 49326 TGATGTCTTCAGTTTTCTTGATCTCCGAAAGAATCACGGCAAGGAGGAGGTTCGTGCCCG 49385 Query 104698 CGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGG 104757 || ||||||| ||| | |||||||||||||| ||||||||| |||| ||| | | ||| Sbjct 49386 AGACCTCTTCTACGCCTTGTGGATTCCAGATCTTTTCATGAAGCGAGTCGAGCAAAATGG 49445 Query 104758 CAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGA 104817 | ||| | || || || || || | || |||||| | | |||| || || || Sbjct 49446 TAGCTGGACACTTTTCTGCCCTAACGAAGCTCCTGGTTTGGCAGATGTTTATGGCGACGA 49505 Query 104818 GTTT---GAA-----------------GCCCT---------TTAC--ACAAAG------- 104839 |||| ||| ||||| ||| |||| | Sbjct 49506 GTTTGAGGAATTATATCACAGGTAAGTGCCCTCCATTGTATTTAGTGACAACGAAATCTA 49565 Query 104840 --------------TACGAGGAAGAAGGTCG-GGCGACTGCGACGGTGCCAGCTGCCGAT 104884 || || | ||||| || ||| | | |||||| | ||| | || Sbjct 49566 ATCACCTGATCAGATATGAACAGGAAGGCCGCGGCCGC-GAGACGGTTCGTGCT-CAGAA 49623 Query 104885 G-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAA 104943 | | ||| | || |||||| || | ||||||||||| || | ||||||||||| ||||| Sbjct 49624 GCTTTGGTACGCCATTCTCGAGGCCCAAACCGAGACCGGCAACCCATACATGCTCTACAA 49683 Query 104944 AGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCT 105003 ||||||||| || | ||||| || || |||||| |||| || || |||||||| Sbjct 49684 AGACGCCTGCAATCGGAAGAGCAACCAGAAGAATCTGGGAACTATTCGCAGCTCCAATCT 49743 Query 105004 CTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATC 105063 || ||||| || | || | |||| || || |||||| ||||| || || || Sbjct 49744 TTGCACAGAGATTATCGAGTACACAGCACCCGACGAAGTGGCTGTCTGTAATCTTGCGTC 49803 Query 105064 AATCGCTCTCCC 105075 | || ||||| Sbjct 49804 TCTTGCCCTCCC 49815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583240896225200