Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1467 143 3e-29 >seq1467 Length=78481 Score = 143 bits (158), Expect = 3e-29 Identities = 345/522 (66%), Gaps = 0/522 (0%) Strand=Plus/Plus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 || ||| || | ||||||| || || || ||||| |||||||| || | | || Sbjct 48907 CCACAGCACATGCTCATGCGTGTTGCCGTTGGCATTCATGGCGAAGATATTGAGAAAGCA 48966 Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222 | ||||| ||||| ||| | | || | ||| || || || |||| || || ||| Sbjct 48967 CTAGAGACGTACGATTATATGTCCAACAAATACTTTACTCATGCTTCGCCCACACTATTC 49026 Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGAC 19282 || ||||| ||| | | |||||||| || ||||| | | |||||||| ||| Sbjct 49027 AATGCCGGCACGCCCTCTGCACAGATGTCCTCATGCTTCCTCATTGACATGAAGGAAGAC 49086 Query 19283 AGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGG 19342 ||||| || ||||| || || || || || ||| || |||||||| | || Sbjct 49087 AGCATCGAAGGCATTTATGACACACTGAAAACGTGTGCCATGATCTCCAAAACCGCTGGC 49146 Query 19343 GGTATCGGGATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAAC 19402 ||||| || | || | || || | | |||| || || ||| |||||| Sbjct 49147 GGTATTGGTCTAAACGTCCACCGCATTCGTGCTACTGGTTCATATATTGGTGGAACGAAC 49206 Query 19403 GGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTC 19462 || | | |||| | | |||||| | || |||| ||||||||| || | || || Sbjct 49207 GGTACATCGAACGGCCTAATACCAATGTTACGAGTCTACAACAACACTGCTCGCTATGTT 49266 Query 19463 AACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCG 19522 ||||||| || || || || | || |||||||||||||||||||||||||| Sbjct 49267 GACCAGGGTGGGAATAAGCGGCCCGGTGCCTTTGCCATCTACCTCGAGCCATGGCACGCT 49326 Query 19523 GACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGC 19582 || ||| | ||| || || || || ||| || || | |||||| | || || Sbjct 49327 GATGTCTTCAGTTTTCTTGATCTCCGAAAGAATCACGGCAAGGAGGAGGTTCGTGCCCGA 49386 Query 19583 GACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAG 19624 ||||||||| |||||||||||||| || || |||||| || Sbjct 49387 GACCTCTTCTACGCCTTGTGGATTCCAGATCTTTTCATGAAG 49428 Score = 131 bits (144), Expect = 2e-25 Identities = 666/1049 (63%), Gaps = 51/1049 (5%) Strand=Plus/Minus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 || |||| ||||||||||| ||||| || ||| ||||||||| | |||||| || Sbjct 50685 GTACGCAGGTAGTACATGCCAGTCTTTAGGCCCAACTTCCATCCAGCGAAGTGCATGCTA 50626 Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATG 78309 | | |||| ||| |||| | | |||| |||||||| |||||||| || || ||| Sbjct 50625 GTGATCTTGCCCATGGTCGGCTCTTTCATGTGAATGTTGAGGGACTGGGATTGATCAATG 50566 Query 78310 TACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTC 78369 | ||||| ||||| || ||||| | | | | ||| | ||| ||||||| ||| Sbjct 50565 AAAGCACCACGGTCAGCAGCCATTTGTACAATGGTACGTTGAGAAATTTCCCAGACTGTC 50506 Query 78370 CGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAG----CGCTTG-TAC-GCTCCCACCG 78423 ||| | || || | || || | |||| | |||| | || || || || Sbjct 50505 TTGTAGAGAGCTTTAATATCGTCAGGAATGTTTGGAATCCGCTGGATAGAGCCACCGTCG 50446 Query 78424 GCTCGCACAATTTCATTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGATCCCGG 78483 ||| | ||| || || || | | | ||| || || | ||| || Sbjct 50445 GCT---ATAATGCGGTTTTTCATGTTATCGGACCAAAGACCCATGTCAACAAGGTCTTTT 50389 Query 78484 ACCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTG 78543 | || | |||| | | ||| || || || || ||||| ||| || || Sbjct 50388 AGGAGCCACGGGTTGACGACCTGGAATTCACCTGCTAGCACACGGCGTGAGTAAATATTA 50329 Query 78544 GTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGC 78603 | ||||| |||||||| || ||||| |||| ||||||| ||| || || || ||| Sbjct 50328 GAGGTGTAAGGCTCGAAGCATTCATTGTTGCCCAGAATCTGGGAGGTGGAAGCTGTGGGC 50269 Query 78604 ATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTC--GA--CCTTTAG 78659 ||||| || || || || || || || | ||| || ||| || || |||| || Sbjct 50268 ATGGGCGCAACAAGGAGGGAGTTGCGGACACC----GTATTGGGCTATGGATGCCTTGAG 50213 Query 78660 G------CCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACC 78713 | |||||||| || | | | || ||||||||| ||| |||||||| Sbjct 50212 TGAATCCCAGTCCCAAAGGTCTGTGGGAGTGACATTCCACATGTCGTATTGGAGGATACC 50153 Query 78714 CTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCA 78773 || || | ||||| || | | | || | |||| || || || || || ||||| Sbjct 50152 CTGAGAAACAGGCGAGCCTTCGTAGGTAGCATAAGGACCAAGTTCTTTAGCAAGCTCGCA 50093 Query 78774 TGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGC 78833 || | || || |||||||| | | |||||| || |||| |||| Sbjct 50092 GGATGAGGTGAGCGCAGCGTGGTAGATGGTCTCGAAAATTTGAATGTTAAGCTT------ 50039 Query 78834 CTTGGTCTC-GTCGAA-CGAAAGGC---CGAGCATCATG-AAGACATCGGCCAGGCCCTG 78887 ||||| ||| | ||| ||||||| ||| | || | ||| |||| || || ||||| Sbjct 50038 CTTGGCCTCTGGAGAATCGAAAGGAAGACGAAGAGCAAGGAAGGCATCAGCAAGACCCTG 49979 Query 78888 GACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTA 78947 |||||| | | | || || || || || | |||||| || ||| | ||| ||||| Sbjct 49978 GACGCCAAGACCAATGGGCCGATGACGGAAGTTGCTGCGGCGAGCCTCTTCGACAGGGTA 49919 Query 78948 AAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAA 79007 | ||| ||||||| || || || || || ||||| | || |||| ||| Sbjct 49918 ATGGTTGACTTCGATGATTTTATTGAGATTGCGAGTCACGACTTGGACTACTTCGTGCAA 49859 Query 79008 TTTGGCGAAATCAAAATGATTTCCTTTG------ATGAAAGTCGGTAGGCACAGCGATGC 79061 ||||| |||||| | | | | ||| | ||| | ||| ||| || || || Sbjct 49858 CTTGGCAAAATCATATTCACCACGATTGTAGTCCACGAAGGACGGGAGGGCAAGAGACGC 49799 Query 79062 CAGGTTGCACACGGCCGTCTCGTCCGG-GCTAGAAACCTCGATGATTTCTGTGCACAAAT 79120 || || || || ||| ||||| || ||| || ||||| || |||||||| | || Sbjct 49798 AAGATTACAGACAGCCACTTCGTCGGGTGCTGTGTAC-TCGATAATCTCTGTGCAAAGAT 49740 Query 79121 TAGA----CGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCC 79176 | || ||| || || || | |||||||||||||||||| || |||||||| Sbjct 49739 TGGAGCTGCGA----ATAGTTCCCAGATTCTTCTGGTTGCTCTTCCGATTGCAGGCGTCT 49684 Query 79177 TTGTAGCACATGTACGGCGTCCCGGTCTC 79205 |||||| |||||| || | |||||||| Sbjct 49683 TTGTAGAGCATGTATGGGTTGCCGGTCTC 49655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548506081591200