Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1467 125 8e-24 seq1044 100 3e-16 >seq1467 Length=78481 Score = 125 bits (138), Expect = 8e-24 Identities = 311/464 (67%), Gaps = 16/464 (3%) Strand=Plus/Plus Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302 ||||||||||| | ||| | | || |||||||| || || |||| || || ||||| Sbjct 48970 GAGACGTACGATTATATGTCCAACAAATACTTTACTCATGCTTCGCCCACACTATTCAAT 49029 Query 53303 GCTGGTACGAATCACCCT---CAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGAC 53359 || || ||| | | || |||||||| |||||||| | | |||||||| ||| Sbjct 49030 GCCGGCACG---CCCTCTGCACAGATGTCCTCATGCTTCCTCATTGACATGAAGGAAGAC 49086 Query 53360 TCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGT 53419 ||||| ||||| || || || || || ||||||| |||||||| | || Sbjct 49087 AGCATCGAAGGCATTTATGACACACTGAAAACGTGTGCCATGATCTCCAAAACCGCTGGC 49146 Query 53420 GGTATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGA 53477 ||||| ||| | || || | || | ||||| | || || || || |||| Sbjct 49147 GGTATTGGTCTAAACG--TCCACCGCATTCGTGCTACTGGTTCATATATTGGTGGAACGA 49204 Query 53478 ACGG--CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTA 53535 |||| | ||| | || | | || ||| | || |||| ||||||||| || || || Sbjct 49205 ACGGTACATCGA--ACGGCCTAATACCAATGTTACGAGTCTACAACAACACTGCTCGCTA 49262 Query 53536 CGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCA 53595 || |||||||||| ||||| || | || ||||||||||||||||| ||||| Sbjct 49263 TGTTGACCAGGGTGGGAATAAGCGGCCCGGTGCCTTTGCCATCTACCTCGAGCCATGGCA 49322 Query 53596 CGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTG 53655 ||| || | | ||||| || || || |||||| || | || ||| | || Sbjct 49323 CGCTGATGTCTTCAGTTTTCTTGATCTCCGAAAGAATCACGGCAAGGAGGAGGTTCGTGC 49382 Query 53656 CCGTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATG 53698 ||| ||||| || ||| || |||||||||| || || |||||| Sbjct 49383 CCGAGACCTCTTCTAC-GCCTTGTGGATTCCAGATCTTTTCATG 49425 >seq1044 Length=7244 Score = 100 bits (110), Expect = 3e-16 Identities = 276/421 (66%), Gaps = 4/421 (1%) Strand=Plus/Minus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 ||||| || || || |||||||| || | ||| |||||||| | |||||| ||||| | | Sbjct 3793 CCAGTACCAATGCCATCTGCACCGTTGACCAGGATCATCGGAAGGACAGGTACGTACATC 3734 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271 |||||||| | | | | ||||| | | |||||||| | || | |||| | | Sbjct 3733 TCAGGCTCGATCGTCTGCCCGTCACTCTCACCATACTTGAGAATTGCGTCGTCATGAGCA 3674 Query 117272 TCGAATATGTTCTTGGTCCAC--GGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAG 117329 | |||||| ||| | || || | || | ||| | ||||||||| ||| || | Sbjct 3673 TGGAATAT--TCTGCGCGCAAAGGGGGAAAGCCTCGTGTAGGTGTAACGAGGGCTGGCCG 3616 Query 117330 CATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGT 117389 | || |||| || |||||| | || || | ||| || ||||| | || | || Sbjct 3615 CGTCACTGCCGCCTTGAAGACGACTTCCAAAATTTCCGCTAGGCTCTAGACAATTGATGT 3556 Query 117390 TGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCAC 117449 |||| | ||||||||||| ||||| | | || || || | | ||||||| Sbjct 3555 TGTTTGAACCCACAAAGTTCTGAGCGAGACCAATGATGGTCTGCTGCATGGATGCCTCAC 3496 Query 117450 CATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTG 117509 ||| ||| |||| | | |||| |||| || || | | | |||||| | || Sbjct 3495 CATATGCATAGTCCGTAGTACCAGACACGGAGCCAGCAAGGTCAACAACCTTCGTATCCT 3436 Query 117510 ACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCAT 117569 | | || || ||||| ||| | ||||| ||||| ||||||| ||||| | |||| Sbjct 3435 TCTTTAGATTTCGCTTGAAGCAAGTATAAAGAACCTTCCGCTGACCAGGCTTGAAGCCAT 3376 Query 117570 C 117570 | Sbjct 3375 C 3375 Score = 95.1 bits (104), Expect = 1e-14 Identities = 183/265 (69%), Gaps = 4/265 (2%) Strand=Plus/Minus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 || ||||| ||||| ||||||||||||||||| |||||||| | | ||| |||| | | Sbjct 3793 CCAGTACCAATGCCATCTGCACCGTTGACCAGGATCATCGGAAGGACAGGTACGTACATC 3734 Query 151936 TCCGGCTCCACCTGTTGACCGTCATCCATCA-CGTATTTCAAAACGGAATTGTCAGCCGG 151994 || ||||| | | || |||||| | ||| | || || | || | | |||| | Sbjct 3733 TCAGGCTCGATCGTCTGCCCGTCA-CTCTCACCATACTTGAGAATTGCGTCGTCATGAGC 3675 Query 151995 ATCGAATATCCGTCGAGTCATAGGACTCAA-ACGCGTGAAGATGTATCGGGAGCTGGCCG 152053 || |||||| | || | || ||| || | |||| || |||| || | |||||||| Sbjct 3674 ATGGAATATTCTGCGCG-CAAAGGGGGAAAGCCTCGTGTAGGTGTAACGAGGGCTGGCCG 3616 Query 152054 CATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGT 152113 | || |||| ||| || || ||||||| | ||| ||||| || |||| || Sbjct 3615 CGTCACTGCCGCCTTGAAGACGACTTCCAAAATTTCCGCTAGGCTCTAGACAATTGATGT 3556 Query 152114 TGTTGGCGCCCACGAAATTCTGAGC 152138 |||| | ||||| || |||||||| Sbjct 3555 TGTTTGAACCCACAAAGTTCTGAGC 3531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547197326254000