Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq1886 116 2e-21 seq8 93.3 3e-14 >seq1886 Length=76891 Score = 116 bits (128), Expect = 2e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | ||||| | ||||||||||||||| ||||||||| ||||| || || ||| Sbjct 24320 CCGCCACGTAGACGAAGCACCAAATGGAGAGTTGACTCCTTTTGGATGTTGTAGTCGGAA 24261 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 |||||||| |||| || | || || ||||| || || | ||||||||| ||||| || Sbjct 24260 AGTGTTCGGCCGTCCTCCAACTGCTTGCCGGCGAAAATCAGACGCTGTTGATCCGGAGGA 24201 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | |||||||| || ||| || | || ||| | ||| || ||| || || Sbjct 24200 ATGCCCTCCTTATC-CTGAATCTTAGACTTGACGTTGTCAATAGTATCTGAAGATTCAAC 24142 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || ||||| ||||||| || || || || || ||||| Sbjct 24141 TTCCAAAGTAATGGTTTTGCCGGTTAGAGTCTTGACGAATATTTGCAT 24094 Score = 104 bits (114), Expect = 1e-17 Identities = 158/220 (72%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||||| || ||||| |||||||||||||| || || || || ||||| Sbjct 24083 AGACGGAGCACCAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCGGAGAGCGTTCGG 24024 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || ||||| || || || ||||| || | ||||||||| ||||| || | || ||| Sbjct 24023 CCATCCTCAAGCTGCTTGCCCGCAAAGATGAGACGCTGTTGATCCGGGGGAATGCCTTCC 23964 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGT-CTTCGCTCTCCACTTCCACGG 34666 ||||| |||| || | || || || ||| || | | || | || ||||| | | Sbjct 23963 TTGTCCTGGATC-TTAGACTTCACATTATCAATAGTATCCGACGAT-TCGACTTCGAGAG 23906 Query 34667 TTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || || || ||||| | ||| || || ||||||||||| Sbjct 23905 TGATGGTCTTTCCGGTGAGCGTCTTAACGAAAATCTGCAT 23866 >seq8 Length=21116 Score = 93.3 bits (102), Expect = 3e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | || | |||||||| |||||| || ||||| || || || Sbjct 1412 CCACCACGAAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAG 1471 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| |||||||| || ||||| || || | |||||||||||||| || Sbjct 1472 AGCGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGGGGA 1531 Query 34600 ACTCCCTCCTTGTCTG 34615 | ||||||||||||| Sbjct 1532 ATGCCCTCCTTGTCTG 1547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314719128356090