Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1886 143 2e-29 >seq1886 Length=76891 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| ||||| || || ||||| |||||||| | |||||| | ||||| ||| | || Sbjct 24094 ATGCAAATATTCGTCAAGACTCTAACCGGCAAAACCATTACTTTGGAAGTTGAATCTTCA 24153 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | ||||| || ||||| || || || ||||| || || |||||| Sbjct 24154 GATACTATTGACAACGTCAAGTCTAAGATTCAGGATAAGGAGGGCATTCCTCCGGATCAA 24213 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || ||||| ||| | || ||||||| |||||| Sbjct 24214 CAGCGTCTGATTTTCGCCGGCAAGCAGTTGGAGGACGGCCGAACACTTTCCGACTACAAC 24273 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || ||||||||||| || | |||||||| | ||| | || || || Sbjct 24274 ATCCAAAAGGAGTCAACTCTCCATTTGGTGCTTCGTCTACGTGGCGG 24320 Score = 122 bits (134), Expect = 8e-23 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || ||||| ||| | || ||||| ||||| ||| |||| Sbjct 23866 ATGCAGATTTTCGTTAAGACGCTCACCGGAAAGACCATCACTCTCGAAGTCGAATCGTCG 23925 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || || || || || ||||| |||||||| || || |||||| Sbjct 23926 GATACTATTGATAATGTGAAGTCTAAGATCCAGGACAAGGAAGGCATTCCCCCGGATCAA 23985 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCG-TTTCCGATTACAA 27166 |||||| | || | || ||||| || | || || | ||| || | ||||| ||||| Sbjct 23986 CAGCGTCTCATCTTTGCGGGCAAGCAGCTTGAGGA-TGGCCGAACGCTCTCCGACTACAA 24044 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||||||| || || | || ||||| | ||| | || ||||| || Sbjct 24045 CATTCAAAAGGAATCTACTCTTCACTTGGTGCTCCGTCTCCGTGGTGGTAT 24095 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || ||||| ||| | ||||||||||| || || | || Sbjct 23638 ATGCAGATCTTCGTCAAGACACTCACCGGAAAGACCATTACTCTTGAGGTCGAGTCATCG 23697 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | ||||| || || || ||||| || || || || || || ||| Sbjct 23698 GATACTATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCAGACCAA 23757 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| ||||| || | || || | ||| | |||||||| ||| Sbjct 23758 CAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGTCCGATTATAAC 23817 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||| ||| | || | || | ||| |||| ||||| || Sbjct 23818 ATTCAGAAAGAGTCCACCCTTCACCTTGTCCTCCGTCTGCGTGGTGGTAT 23867 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 27010 TGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAAC 27069 ||||||||||| | || || ||||| ||||| ||||||| | || || | || || Sbjct 23432 TGACCGGCAAGACCATCACCCTTGAGGTGGAGTCGTCCGATACTATCGACAACGTTAAGT 23491 Query 27070 AAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCA 27129 || || || ||||| |||||||| || || || || ||||| || || | ||| |||| Sbjct 23492 CGAAGATCCAGGACAAGGAAGGCATCCCGCCTGACCAGCAGCGCTTGATCTTCGCGGGCA 23551 Query 27130 AACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTAC 27189 | || | |||||| | ||| | || || ||||| || || |||||||| || ||| Sbjct 23552 AGCAGCTCGAAGACGGCAGGACTCTGTCGGACTACAATATCCAGAAGGAGTCCACTCTAC 23611 Query 27190 ATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || | || | || | || ||||| || Sbjct 23612 ATCTCGTGCTCCGCCTTCGTGGTGGTAT 23639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434903558409600