Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1886 185 2e-41 seq1747 116 9e-21 >seq1886 Length=76891 Score = 185 bits (204), Expect = 2e-41 Identities = 168/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||||||||| ||||||||||| || ||||||||||| | ||||| | ||||| Sbjct 23849 AGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGACAGGGTGCGGCCATCC 23790 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || || |||||||| ||||| | || ||||||||| Sbjct 23789 TCAAGCTGCTTGCCAGCGAAGATCAGACGCTGTTGGTCTGGAGGGATACCCTCCTTGTCC 23730 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||| || || || || ||||| ||||| || ||| Sbjct 23729 TGGATCTTCGACTTGACATTGTCGATAGTATCCGATGACTCGACCTCAAGAGTAATGGTC 23670 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| ||||| || || | |||||| Sbjct 23669 TTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 23638 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||||||||| || || ||||| ||||| || || | || || | ||||| Sbjct 24077 AGCACCAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCGGAGAGCGTTCGGCCATCC 24018 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| || || ||||| || || |||| |||||||||||| Sbjct 24017 TCAAGCTGCTTGCCCGCAAAGATGAGACGCTGTTGATCCGGGGGAATGCCTTCCTTGTCC 23958 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || || || || || || ||| || ||||||||||| ||| Sbjct 23957 TGGATCTTAGACTTCACATTATCAATAGTATCCGACGATTCGACTTCGAGAGTGATGGTC 23898 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| ||||| || || | |||||| Sbjct 23897 TTTCCGGTGAGCGTCTTAACGAAAATCTGCAT 23866 Score = 150 bits (166), Expect = 4e-31 Identities = 152/198 (77%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || || || ||||||||||| || ||||| || || |||| || || Sbjct 23631 ACGAAGGCGGAGCACGAGATGTAGAGTGGACTCCTTCTGGATATTGTAGTCCGACAGAGT 23572 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 ||| || ||||| ||||||||||| |||||||| | ||| || |||||||| || | || Sbjct 23571 CCTGCCGTCTTCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCC 23512 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||||||||||||| || ||||| ||||| || || || || ||||| || Sbjct 23511 TTCCTTGTCCTGGATCTTCGACTTAACGTTGTCGATAGTATCGGACGACTCCACCTCAAG 23452 Query 211073 AGTGATCGTCTTTCCCGT 211090 ||||| ||||| || || Sbjct 23451 GGTGATGGTCTTGCCGGT 23434 Score = 127 bits (140), Expect = 5e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || ||||| ||||| ||||||||||| || || | ||| || | || || |||| |||| Sbjct 24296 TGGAGAGTTGACTCCTTTTGGATGTTGTAGTCGGAAAGTGTTCGGCCGTCCTCCAACTGC 24237 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 ||||| ||||| || || || ||||| || ||||||| || ||||| ||||| ||||| Sbjct 24236 TTGCCGGCGAAAATCAGACGCTGTTGATCCGGAGGAATGCCCTCCTTATCCTGAATCTTA 24177 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 || ||||| || || || || || |||||| || | ||| || || || || || Sbjct 24176 GACTTGACGTTGTCAATAGTATCTGAAGATTCAACTTCCAAAGTAATGGTTTTGCCGGTT 24117 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 |||||||| || || | ||||| Sbjct 24116 AGAGTCTTGACGAATATTTGCAT 24094 >seq1747 Length=57527 Score = 116 bits (128), Expect = 9e-21 Identities = 133/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || ||| |||| ||||| || | ||||| || |||||||| Sbjct 34913 TTCTGGATGTTGTAGTCGCTAAGCGTCCGGCCATCCTCTAATTGCTTTCCAGCGAAGATC 34972 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 | ||| |||||||| || |||| || ||||| ||||||||||| || || || ||| Sbjct 34973 AAGCGCTGTTGGTCCGGGGGAATGCCCTCCTTATCCTGGATCTTCGACTTTACATTGTCG 35032 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 || || ||| ||| |||||||| ||||| || || |||||||| ||||| || || Sbjct 35033 ATAGTATCACTCGATTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTCTTGACGAA 35091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159111455036450