Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1467 221 2e-52 >seq1467 Length=78481 Score = 221 bits (244), Expect = 2e-52 Identities = 603/913 (66%), Gaps = 9/913 (1%) Strand=Plus/Minus Query 76505 TGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTC 76564 |||| |||||| ||||| || || || ||||||| ||||||||||| ||| || Sbjct 49525 TGTG-ATATAATTCCTCAAACTCGTCGCCATAAACATCTGCCAAACCAGGAGCTTCGTTA 49467 Query 76565 GGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATC 76624 || || | | || ||| ||||| || || || || ||||| || ||||| || ||| Sbjct 49466 GGGCAGAAAAGTGTCCAGCTACCATTTTGCTCGACTCGCTTCATGAAAAGATCTGGAATC 49407 Query 76625 CATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGA 76684 || | || || || ||||||| | | || || || || ||||||| ||| Sbjct 49406 CACAAGGCGTAGAAGAGGTCTCGGGCACGAACCTCCTCCTTGCCGTGATTCTTTCGGAGA 49347 Query 76685 TCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGT 76744 || || || | | ||||| |||||||| || || || || || | |||| || Sbjct 49346 TCAAGAAAACTGAAGACATCAGCGTGCCATGGCTCGAGGTAGATGGCAAAGGCACCGGGC 49287 Query 76745 CGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGA 76804 || ||||| || ||||| || | ||| | |||||||| || || |||| |||||||| Sbjct 49286 CGCTTATTCCCACCCTGGTCAACATAGCGAGCAGTGTTGTTGTAGACTCGTAACATTGGT 49227 Query 76805 ATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTA 76864 || | |||||| |||||||| || |||||| |||||| ||| |||||||| Sbjct 49226 ATTAGGCCGTTCGATGTACCGTTCGTTCCACCAATATATGAACCAGTAGCACGAATGCGG 49167 Query 76865 CTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTG 76924 | ||| || || || || || |||| ||||| | ||||| ||||| |||| Sbjct 49166 TGGACGTTTAGACCAATACCGCCAGCGGTTTTGGAGATCATGGCACACGTTTTCAGTGTG 49107 Query 76925 TCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGA 76984 ||||| ||||| || || || || ||| |||||| || || || || ||||| || Sbjct 49106 TCATAAATGCCTTCGATGCTGTCTTCCTTCATGTCAATGAGGAAGCATGAGGACATCTG- 49048 Query 76985 TGATGA-ACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGA 77043 || || || || ||||| || | ||| || || |||||||| || |||| | || Sbjct 49047 TGCAGAGGGCGTGCCGGCATTGAATAGTGTGGGCGAAGCATGAGTAAAGTATTTGTTGGA 48988 Query 77044 AAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGAC 77103 | || ||| || || | || || ||||| |||||| || || || || Sbjct 48987 CATATAATCGTACGTCTCTAGTGCTTTCTCAATATCTTCGCCATGAATGCCAACGGCAAC 48928 Query 77104 ACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGA 77163 |||||| | ||| ||||| ||||| || ||||||| | ||| | | ||||| Sbjct 48927 ACGCATGAGCATGTGCTGTGGTCGCTCAGCAGTCTTGCCGTCGATTCGTAGGAGATATGA 48868 Query 77164 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAAC 77223 | ||| | || || || ||||| | | ||| ||||||| ||||||| ||| | Sbjct 48867 TCGTTCAAGTGTCTTGAATCCAAAGAATTGGTAGTTGAAGTCTCGGTCGTAAACTATAGC 48808 Query 77224 CGAATTTAGTTTGTCCTTATATTTGGTAACAATATC-CATGACAGTGGTAGAAATAATTG 77282 || || | | ||| |||||| | ||||| || ||| | || || || | Sbjct 48807 GGAGTTCAAGTCTTCCGCATATTTCATGACAATGTCGTATG-TTTCCTTCGAGATCATCG 48749 Query 77283 GAGATCGT-ATTC-CATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCT 77340 | | ||| ||| || ||||| |||| |||| | | ||| || || | Sbjct 48748 GCG--CGTGCTTCTTGTTCTTAGGGTTAATGTAGTGGTAGAGGTCAGATATCACCGCCGA 48691 Query 77341 AAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGC 77400 ||| | || ||||||| ||||| ||||| || || || || | ||| ||||| || || Sbjct 48690 GAATTGCTTCTTTGTTTGTTTGTGAAGATTAGAAACAGCAATGCGAGCTGCTAGGATCGC 48631 Query 77401 ATAGTCAGGATGT 77413 ||||||||||||| Sbjct 48630 ATAGTCAGGATGT 48618 Score = 132 bits (146), Expect = 7e-26 Identities = 546/852 (64%), Gaps = 28/852 (3%) Strand=Plus/Minus Query 75365 TTCTTATCCAAC-GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACAT 75423 ||||| |||| ||||||||||| || | || || | | ||||| || |||||||| Sbjct 50728 TTCTTGATCAACAGTGAACTGAATAGGGGCAGAGGCGGCCATAGTACGCAGGTAGTACAT 50669 Query 75424 ACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACT 75483 ||||| ||||| |||| ||||||| ||| |||||||| || | ||| | Sbjct 50668 GCCAGTCTTTAGGCCCAACTTCCATCCAGCGAAGTGCATGCTAGTGATCTTGCCCATGGT 50609 Query 75484 CGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGC 75543 ||| || || ||||| || | ||||| |||||| |||||||| || | ||||| Sbjct 50608 CGGCTCTTTCATGTGAATGTTGAGGGACTGGGATTGATCAATGAAAGCACCACGGTCAGC 50549 Query 75544 CGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGAT 75603 ||||||| || |||||| ||||| ||||||||| | || ||| | | ||| || Sbjct 50548 AGCCATTTGTACAATGGTACGTTGAGAAATTTCCCAGACTGTCTTGTAGAGAGCTTTAAT 50489 Query 75604 ATCATCTGGAAGATTTGTATT---TTGAATGGATCCGCCATCAGATATAATTGTATTCTT 75660 ||| || |||| |||| | | || || || || || || | |||||| || || Sbjct 50488 ATCGTCAGGAATGTTTGGAATCCGCTGGATAGAGCCACCGTCGGCTATAATGCGGTTTTT 50429 Query 75661 GATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAAT 75720 || | ||| ||| | | || | || | ||||| || || || | Sbjct 50428 CATGTTATCGGACCAAAGACCCATGTCAACAAGGTCTTTTAGGAGCCACGGGTTGACGAC 50369 Query 75721 TTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGA 75780 || ||||| || | | || | || | |||||||||| ||| || || || | | Sbjct 50368 CTGGAATTCACCTGCTAGCACACGGCGTGAGTAAATATTAGAGGTGTAAGGCTCGAAGCA 50309 Query 75781 TTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACT 75840 ||||||||| |||| ||| || | || ||||| || ||||| || || || | | Sbjct 50308 TTCATTGTTGCCCAGAATCTGGGAGGTGGAAGCTGTGGGCATGGGCGCAACAAGGAGGGA 50249 Query 75841 ATTTCTGAGACCATGTGTTCTGAT-TTTAT-CTTTTAGATATTTCCAATCCCAAAGATCT 75898 || | || ||| || || | | | || | || || | | ||| |||||||| ||| Sbjct 50248 GTTGCGGACACC--GTATTGGGCTATGGATGCCTTGAGTGAATCCCAGTCCCAAAGGTCT 50191 Query 75899 GATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTA 75958 | || |||| ||| | |||||||| || || || | | || || || | Sbjct 50190 GTGGGAGTGACATTCCACATGTCGTATTGGAGGATACCCTGAGAAACAGGCGAGCCTTCG 50131 Query 75959 TATGTTTCGTAAGTCCC--GTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGT 76016 || || | |||| || || |||| ||| || ||||| | | |||| ||| Sbjct 50130 TAGGTAGCATAAGGACCAAGTTCTTT--AGCAAGCTCGCAGGATGAGGTGAGCGCAGCGT 50073 Query 76017 AATAAATTGTTTCGAAAATCTTCTTATTAAG-ATCTTGCGCTTCAAGACTATCAAAAGGA 76075 || || || |||||||| | | ||||| ||||| || || || ||| |||||| Sbjct 50072 GGTAGATGGTCTCGAAAATTTGAATGTTAAGCTTCTTG-GCCTCTGGAGAATCGAAAGGA 50014 Query 76076 TAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGT 76135 | | | | || || ||||| || || ||||| || |||| |||||| || | ||| Sbjct 50013 AGACGAAGAGCAAGGAAGGCATCAGCAAGACCCTGGACGCCAAGACCAATGGGCCGATGA 49954 Query 76136 CTCTTATTGGAAATTTC-------AGCTTCTGGAATAGGGTAATAATTAATATCTATAAT 76188 | |||| || | ||| ||| | |||||||| || | || || || Sbjct 49953 C-------GGAAGTTGCTGCGGCGAGCCTCTTCGACAGGGTAATGGTTGACTTCGATGAT 49901 Query 76189 TTTATTGAGATT 76200 |||||||||||| Sbjct 49900 TTTATTGAGATT 49889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712910071113600