Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1886 181 2e-40 seq1747 143 6e-29 seq8 105 1e-17 >seq1886 Length=76891 Score = 181 bits (200), Expect = 2e-40 Identities = 177/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || | || ||| ||||| ||||||||||| | Sbjct 24093 ACCACCACGGAGACGGAGCACCAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCGGA 24034 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| ||||||||||| || || || || |||||||| | ||| ||||| || || Sbjct 24033 GAGCGTTCGGCCATCCTCAAGCTGCTTGCCCGCAAAGATGAGACGCTGTTGATCCGGGGG 23974 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || |||||||| |||||||| | || || |||| ||||| ||||| | |||||| Sbjct 23973 AATGCCTTCCTTGTCCTGGATCTTAGACTTCACATTATCAATAGTATCCGACGATTCGAC 23914 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||||||||| ||||| || || | ||||||||||| |||||||| Sbjct 23913 TTCGAGAGTGATGGTCTTTCCGGTGAGCGTCTTAACGAAAATCTGCAT 23866 Score = 163 bits (180), Expect = 6e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || || || || | ||| ||||| || ||||| || || | Sbjct 23865 ACCACCACGCAGACGGAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGA 23806 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || || || ||||||| ||| |||||||| || Sbjct 23805 CAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGTTGGTCTGGAGG 23746 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| | || || | |||||||| ||||| | ||||| Sbjct 23745 GATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATAGTATCCGATGACTCGAC 23686 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| || ||||| || || | ||||| ||||| |||||||| Sbjct 23685 CTCAAGAGTAATGGTCTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 23638 Score = 150 bits (166), Expect = 4e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || ||||| |||| ||| | || || ||||||||||||||||| | Sbjct 24321 ACCGCCACGTAGACGAAGCACCAAATGGAGAGTTGACTCCTTTTGGATGTTGTAGTCGGA 24262 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || ||||| ||||| | || || ||||| || |||| ||| ||||| || || Sbjct 24261 AAGTGTTCGGCCGTCCTCCAACTGCTTGCCGGCGAAAATCAGACGCTGTTGATCCGGAGG 24202 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||| || || ||||| | || ||| | || ||||| || |||| ||| || Sbjct 24201 AATGCCCTCCTTATCCTGAATCTTAGACTTGACGTTGTCAATAGTATCTGAAGATTCAAC 24142 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | ||| || || || || || | |||||| |||||||| ||||| Sbjct 24141 TTCCAAAGTAATGGTTTTGCCGGTTAGAGTCTTGACGAATATTTGCAT 24094 >seq1747 Length=57527 Score = 143 bits (158), Expect = 6e-29 Identities = 139/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| |||||| ||||||||||||| ||| || || || |||||| Sbjct 34913 TTCTGGATGTTGTAGTCGCTAAGCGTCCGGCCATCCTCTAATTGCTTTCCAGCGAAGATC 34972 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 || || |||||||| ||||| |||||||| || |||||||| | ||||| | ||| Sbjct 34973 AAGCGCTGTTGGTCCGGGGGAATGCCCTCCTTATCCTGGATCTTCGACTTTACATTGTCG 35032 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 ||||| || | ||| || ||||| ||||| || |||||||| | ||||| ||||| Sbjct 35033 ATAGTATCACTCGATTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTCTTGACGAA 35091 >seq8 Length=21116 Score = 105 bits (116), Expect = 1e-17 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || || | || || || |||||||||||||| | Sbjct 1411 ACCACCACGAAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGA 1470 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||| ||||| ||||| || ||||| ||||||| || |||||||| || Sbjct 1471 GAGCGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGGGG 1530 Query 282992 AATACCCTCCTTGTCT 283007 ||| |||||||||||| Sbjct 1531 AATGCCCTCCTTGTCT 1546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046702587025420