Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glonium_20stellatum_20[genbank_20GCA_5F001692915.1_202016-07-26] 2,730 sequences; 40,521,621 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1886 132 1e-25 seq1747 102 2e-16 >seq1886 Length=76891 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| ||||| || || || || ||||| || || || Sbjct 23641 CAGATCTTCGTCAAGACACTCACCGGAAAGACCATTACTCTTGAGGTCGAGTCATCGGAT 23700 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||| |||||||| || || |||||||| ||||| || Sbjct 23701 ACTATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCAGACCAACAG 23760 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| || ||||| | || || ||||||||||| | Sbjct 23761 CGTCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGTCCGATTATAACATT 23820 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || ||||| || || || || ||||| Sbjct 23821 CAGAAAGAGTCCACCCTTCACCTTGT 23846 Score = 127 bits (140), Expect = 5e-24 Identities = 139/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 || || || || |||||||| |||||||| || || || ||||| ||||| || Sbjct 23434 ACCGGCAAGACCATCACCCTTGAGGTGGAGTCGTCCGATACTATCGACAACGTTAAGTCG 23493 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| |||||||| ||||| ||||| || |||||||| || | |||||||| || || Sbjct 23494 AAGATCCAGGACAAGGAAGGCATCCCGCCTGACCAGCAGCGCTTGATCTTCGCGGGCAAG 23553 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 ||||||||||| || |||||||| | || || || |||| || || || || || ||| Sbjct 23554 CAGCTCGAAGACGGCAGGACTCTGTCGGACTACAATATCCAGAAGGAGTCCACTCTACAT 23613 Query 178125 CTTGT 178129 || || Sbjct 23614 CTCGT 23618 Score = 123 bits (136), Expect = 6e-23 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||||| || || ||||| || || | || || ||| ||||| Sbjct 24097 CAAATATTCGTCAAGACTCTAACCGGCAAAACCATTACTTTGGAAGTTGAATCTTCAGAT 24156 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || |||||||| ||||||||||| || || || || |||||||| || || Sbjct 24157 ACTATTGACAACGTCAAGTCTAAGATTCAGGATAAGGAGGGCATTCCTCCGGATCAACAG 24216 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || |||||||| || ||| | || || || | || ||| |||| || ||| || Sbjct 24217 CGTCTGATTTTCGCCGGCAAGCAGTTGGAGGACGGCCGAACACTTTCCGACTACAACATC 24276 Query 178104 CAAAAAGAATCAACACTGCAT 178124 ||||| || ||||| || ||| Sbjct 24277 CAAAAGGAGTCAACTCTCCAT 24297 >seq1747 Length=57527 Score = 102 bits (112), Expect = 2e-16 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 ||||| || || ||||| || ||||| |||||||||||||| ||| || || ||| Sbjct 35091 TTCGTCAAGACCCTCACGGGTAAAACCATCACCCTCGAGGTAGAATCGAGTGATACTATC 35032 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || || || || ||||| ||||| || || || || || |||||||| || || | Sbjct 35031 GACAATGTAAAGTCGAAGATCCAGGATAAGGAGGGCATTCCCCCGGACCAACAGCGCTTG 34972 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 |||||||| ||||| || | || ||||| |||| ||| ||| || ||| |||| || Sbjct 34971 ATCTTCGCTGGAAAGCAATTAGAGGATGGCCGGACGCTTAGCGACTACAACATCCAGAA 34913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203689095739620