Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Graphilbum_20fragrans_20[genbank_20GCA_5F001513895.1_202016-01-13] 80 sequences; 34,270,891 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq31 89.7 4e-13 >seq31 Length=224113 Score = 89.7 bits (98), Expect = 4e-13 Identities = 132/182 (73%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 33540 CGTCAAGATCAAGCTGCGCAAGATACGCATACCAGAGATGGGCGACAAGTTTGCATCG-T 33598 ||||||| | || |||| ||| || || ||||| ||||||||||| | ||| Sbjct 198720 CGTCAAGGTGCAGACGCGCCAGACGCGGCGCCCCGAGATCGGCGACAAGTTCTCGTCGCG 198779 Query 33599 TCACGGCCCAGAAGGGC-ACGTGCGGCATGATGTACGACCAGTGGGACATGCCGTTCACG 33657 ||||| ||| |||||| ||| |||||| || ||||||| ||||||||| || | Sbjct 198780 CCACGG-CCAAAAGGGCGTCGT-CGGCATCATCGTCGACCAGGAGGACATGCCCTTTAGC 198837 Query 33658 GCCGACGGCGTGGTCCCGGACCTAGTCATCAACCCGCATGCGTTCCCCTCGCGCATGACG 33717 | | ||||||| ||| ||| | |||| |||||||| | | ||||||||||||||| Sbjct 198838 GACAGCGGCGTGTGCCCCGACATGATCATGAACCCGCACGGCTACCCCTCGCGCATGACC 198897 Query 33718 GT 33719 || Sbjct 198898 GT 198899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356233252672240