Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Graphilbum_20fragrans_20[genbank_20GCA_5F001513895.1_202016-01-13] 80 sequences; 34,270,891 total letters Query= NC_005261.2 Length=137821 Score E Sequences producing significant alignments: (Bits) Value seq65 114 1e-20 >seq65 Length=1243962 Score = 114 bits (126), Expect = 1e-20 Identities = 168/236 (71%), Gaps = 14/236 (6%) Strand=Plus/Plus Query 99543 CCGCACGGTGAGCGAGGTGTTGAGCAGCAGCACGCCGCGGCGCGCCCA---GGCCTCCAG 99599 |||||||||||| | |||||||||| || |||||||| ||||| || | ||| Sbjct 744979 CCGCACGGTGAGACACGTGTTGAGCATGAGGACGCCGCGCTCGGCCCACGGGGTCAACAG 745038 Query 99600 GCAGCCGTGCTGCGGCCGCGG---------GGTCCCGGGGAAGTTCTTCTGCACGGCCGC 99650 || ||| ||| || | |||| ||| || ||| ||| || | || | Sbjct 745039 GCCGCCCTGCGACGACGGCGGCGGCGCAAAGGTGCCCGGGTAGTCGCGCTTGAGCGCGGT 745098 Query 99651 GTAGATGTTCTGGAGGCTGGGCGGGATCGGAACGCCGCGG-TTCACGCTGAAGGCCAGGC 99709 ||| ||||| | || ||||| || ||| |||| || ||| ||||||||| | Sbjct 745099 GTACATGTTGCGCAGCGACGGCGGCGGGGGGACGG-GCGGCTTGACGGAGAAGGCCAGCC 745157 Query 99710 CGTGGGCCTGCCCGTGGCTGTGGTAGGGGTCCTGGCCCAGGATGACGACCTTGACG 99765 |||| ||||| |||||| ||||||||||||||||||| |||||||||||||||||| Sbjct 745158 CGTGAGCCTGGCCGTGGTTGTGGTAGGGGTCCTGGCCGAGGATGACGACCTTGACG 745213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440898759100800