Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Graphilbum_20fragrans_20[genbank_20GCA_5F001513895.1_202016-01-13] 80 sequences; 34,270,891 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq13 183 3e-41 >seq13 Length=672118 Score = 183 bits (202), Expect = 3e-41 Identities = 195/255 (76%), Gaps = 2/255 (1%) Strand=Plus/Minus Query 5502 CGCCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCTT 5561 |||||||| || |||||||| ||||| | || | | ||||| |||||||||| Sbjct 61411 CGCCCGTGCTGCCAAATCCGCCCGCGCCGCGCTCGCTCGCCTCCAGCGACGCCACCTCCA 61352 Query 5562 CCACATCGGGGAACGCAGCGCGCTCGCAG-ATCAGCTGCGCTATTCGGTCGCCCGTCTTT 5620 |||| ||||| | || |||||| ||| | ||||||||| | |||||||||| | Sbjct 61351 CCACGTCGGGCGTCACAATGCGCTC-CAGCACCAGCTGCGCCACGCGGTCGCCCGCCGCC 61293 Query 5621 ACCTCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCG 5680 || | || | | | ||||| |||||| |||| ||||| ||||| ||||||||||||| Sbjct 61292 ACGGCAAAGTTTTCGGGGCCGTGGTTGAAGAGCAGCACGCGCACGTGGCCGCGGTAGTCG 61233 Query 5681 GCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGA 5740 ||||| |||||||| ||||| |||||| |||||||| | || ||||||||||| || Sbjct 61232 GCGTCAATCACGCCGGCGCCGGTGTCGATAAAGTGCTTAGCGGCGAGGCCGGAGCGCGGG 61173 Query 5741 GCCACGCGGCCGTAG 5755 ||||||||||||||| Sbjct 61172 GCCACGCGGCCGTAG 61158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430053980696960