Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Graphilbum_20fragrans_20[genbank_20GCA_5F001513895.1_202016-01-13] 80 sequences; 34,270,891 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq18 152 6e-32 seq19 111 2e-19 >seq18 Length=496665 Score = 152 bits (168), Expect = 6e-32 Identities = 843/1333 (63%), Gaps = 27/1333 (2%) Strand=Plus/Plus Query 109751 GGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGG 109810 |||| ||||| | |||||||| || || ||||| |||||||| ||||| |||| || | Sbjct 376801 GGTAAATGTTGGAGGTGTAGGGCTCAAAGCACTCGTTGTTGCCCAGGATCTGTGACGTCG 376860 Query 109811 AAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCT 109870 | || || |||||||| ||||| || |||||||| |||| || | | |||| | | Sbjct 376861 AGGCCGTCGGCATGGGCGCCATCAGCAGACTGTTGCGGATGCCGTGCTTCTTGATCTTGG 376920 Query 109871 CACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTG 109930 |||||| | ||| || | || | | | | | || || |||||| || | Sbjct 376921 CACGCAGCTCAGTCCAGTCCCACAGATC-CGAGG----GCGTGAC-ATTCCACATGTCCG 376974 Query 109931 GTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGAC-CCCTCAACC 109989 | || || | |||| | |||| || |||| | | | |||| ||| ||||| | | Sbjct 376975 GCTGCAGGATGCCCTGCGACACAGGCGAGCCCTCGTACGACGCGTA-GACGCCCTCGATC 377033 Query 109990 TCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCA 110049 ||||||| |||| || | ||| || || || || || || ||||| || || || Sbjct 377034 TCGGCCAGCTCGCTCGAGGTCTCGAGAGCAGCGTGGTAGATGGTCTCGAAGATCTGGATG 377093 Query 110050 TTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGA-ATAAACACATCCGC 110108 || | ||| | ||| | || || || | | || | | ||| |||| || Sbjct 377094 TTGAGCTTGCGCGCCTCGGGCGACTCAAATGGCATGCG-CAGCGCCAAAAAGGCATCAGC 377152 Query 110109 TAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTC 110168 || ||||| | ||| | ||||||||| || || |||||| | ||||| Sbjct 377153 CAGGCCCTGGATACCCACACCAATGGGACGGTGGCGCATGTTGCTGTTGCGAGCCTCGGG 377212 Query 110169 TACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGAT 110228 || ||||| ||||| ||| |||| || || || || | || ||| || | Sbjct 377213 CACCGGGTAGTAGTTGACGTCAATGATGCGGTTCAGGTTGCGCACAACGACCTTGGTCAC 377272 Query 110229 TTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGC 110288 || || || | | | ||| | | | | || | || | || || || Sbjct 377273 ATCGTGCAGGGCCTTGAAGTCGTAGCTCTGGTTGGACTGGTCCACGAAAGCCGGCAGGGC 377332 Query 110289 AATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGT 110348 ||| || || || ||||| |||| |||||| | | | ||| || | ||| ||||| Sbjct 377333 AATGGAGGCCAGGTTGCAGACAGCGACCTCGTCAGGGGCCGAGTACTCGACAATCTCCGT 377392 Query 110349 ACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGC 110408 ||||||||||| || ||| |||||||||||||| || ||| |||||| Sbjct 377393 GCACAAGTTGGAGCTGCGGATGGTGCCCAAGTTCTTCTGGTTGCTCTTGCGGTTGCAGTG 377452 Query 110409 ATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCA 110468 ||||| || |||||| | ||| | || || || ||||| | || |||||||| | ||| Sbjct 377453 GTCCTTGTACAGCATGAAGGGGTTGCCGGTCTCGGTCTGGGCCTCAAGAATGGCATACCA 377512 Query 110469 TA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACA 110527 | | || | || || || || | | || |||| ||||||||| ||||| Sbjct 377513 CAGCTTCTG-AGCCTTGATGGTGCCGCGGCCACGGCCCTCCTTCTCGTACTTTTCGTACA 377571 Query 110528 AGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGA 110587 | | || || |||| ||||| || | || || || | || || | || Sbjct 377572 GGGCTTCGAACTCCTCGCCGTAGCAGTCGGCCAGGCCAGGGCACTCGCTAGGGCACATGA 377631 Query 110588 GGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCG 110647 | | ||| | || || ||| || | |||||||||||| ||||| ||||||| ||| Sbjct 377632 GCGTCCAGGTGCCGTTCTTCTCCACGCGCTTCATGAACAGATCAGGTATCCACAGAGCCA 377691 Query 110648 AGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGT 110707 ||| || |||||| || ||| || | || ||||| ||| || || | || | Sbjct 377692 TGAACAGATCACGGGCGCGGATCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGGAACT 377751 Query 110708 CCATGATATCCGAGTGCCATGGTTCGAGAT------AGACAGCGATGGATCCCTTACGAC 110761 | | || || | |||||| || || || | ||| |||| || | ||| Sbjct 377752 CAAAGACGTCGGCGTGCCACGGCTCCAGGTAGATGCAGAAAGCGCCGGGGCGCTT---GT 377808 Query 110762 GACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTC 110821 || |||||| || ||||| || ||| |||||||| | ||||| || || || | Sbjct 377809 TTCCGCCCTGGTCGACGTAGCGAGCCGTGTTGTTGAAGACGCGCAGCATGGGGATGATGC 377868 Query 110822 CATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATAT 110881 | | ||| || || || || ||| ||| ||||||| ||| ||| || | Sbjct 377869 CGTTGGAGGTGCCGTTGGTGCCGGCAATGTAGGATCCTGTGGCACGGATGCGGTGTATGT 377928 Query 110882 GCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGTACCATAA 110940 | ||||| || || ||| ||| ||| ||||| ||| |||| || | ||| Sbjct 377929 TGAGGCCAATGCCGCCAGCCGTCTTGGAAATCATGGCACAGGTCT-TGAGGGTGTCGTAA 377987 Query 110941 ATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGA 111000 || || || || || ||||| || | | || ||||| || |||| ||||| | Sbjct 377988 ATGCCCTCGATGCTGTCGTCCTTGATGTCGACCAGGAAGCACGACGACAGCTGAGCCTGC 378047 Query 111001 GGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG--GGACATCT 111058 ||||| || || ||||| || || |||| || ||| ||| || |||| |||||| | Sbjct 378048 GGCGTACCGGCGTTGAAAAGCGTGGGTGAGGCGTGAGTGA--AGGACTTGCTGGACATGT 378105 Query 111059 TGTTGTATGTGTC 111071 |||||| || || Sbjct 378106 AGTTGTAGGTCTC 378118 >seq19 Length=496586 Score = 111 bits (122), Expect = 2e-19 Identities = 333/502 (66%), Gaps = 18/502 (4%) Strand=Plus/Minus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 |||||||| ||||| || || | || || | || ||||| ||| || ||||| | Sbjct 442268 CGATCGAAGCGACCAGGTCGCATTAAGGCTTTGTCGAGAATGTCGGGGCGATTTGTTCCC 442209 Query 11563 GCAATGACTACAATGCCAGTCTCAT---TGTCGAAACCGTCCATTTCTGTGAGAAGCTGG 11619 || | || |||| || | |||| ||| ||| |||||||| || ||||| | ||| Sbjct 442208 GCCAGAACAACAA--CCTG-CTCAGACGTGTTGAAGCCGTCCATCTCCGTGAGGATCTGA 442152 Query 11620 TTGATCGTCTGTTCACGCTCATCGTTGG----AGGGCATA--CCACCTGCCGAACGCTTC 11673 || | || ||| ||||| |||||| || || | | |||| | ||| | Sbjct 442151 TTCAGTGTTGCTTCCCGCTCCTCGTTGCCACCAGAGCTGAAGCGACCTTCGCTACGAGAC 442092 Query 11674 TTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGT 11733 || | || |||||||| ||||| || | ||| || || | | ||||| ||| Sbjct 442091 CGGCCAATGGCATCAATCTCGTCGATAAAGATGATGCAAGGGGCGCTCTTCCGTGC-TGT 442033 Query 11734 T-CGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGC 11792 | ||||| || || || | ||| |||||||| || |||||||| || || | | Sbjct 442032 CGCAAAAAGATCGCGCACTCTAGACGCACCAACACCAACAAACATCTCCACAAACTCAGA 441973 Query 11793 GGCAGA-ACACTGAATGAAGGGAACATTAGACTCACCAGC-GATGGCTCGAGCGAGGAGA 11850 | || |||||||| ||| || ||| ||||| ||||| | || || | || || ||| Sbjct 441972 GCCACTGACACTGAA-GAACGGCACACCTGACTCGCCAGCTGTTGCCTTG-GCCAGAAGA 441915 Query 11851 GTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTT 11910 || ||||| ||||| || | ||| || |||| ||| || || ||||||||||| || | Sbjct 441914 GTTTTACCAGTACCTGGAGGACCGGCTAGAATGGCTCCGCGTGGGATCTTGGCGCCGAGT 441855 Query 11911 CCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCG 11970 | | | | ||||| | ||| | |||| ||||| |||| || || |||||| Sbjct 441854 CGCTGGAACCTTTCAGGTTGCTTCAAGAAGCTCACAAACTCCATAATCTCTAGCTTGGCC 441795 Query 11971 GAGTCGATACCCTCAACATCGG 11992 ||| || || |||| |||| Sbjct 441794 TCGTCCATTCCTGCAACGTCGG 441773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975411024000