Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Graphilbum_20fragrans_20[genbank_20GCA_5F001513895.1_202016-01-13] 80 sequences; 34,270,891 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq19 114 1e-20 >seq19 Length=496586 Score = 114 bits (126), Expect = 1e-20 Identities = 191/274 (70%), Gaps = 4/274 (1%) Strand=Plus/Plus Query 34351 ACAAACTTGCGGATGAAACCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCG 34410 ||||||||| |||||| || || || |||||| | ||| | ||||||| ||| Sbjct 224520 ACAAACTTGGAGATGAAGCCGTCGAGGTAGTCCTGCAGCTTGTTCGCCTCGTGGGCTCCG 224579 Query 34411 TTGACGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCG 34470 |||| ||| | || |||| |||| | || || |||||||||||| | || Sbjct 224580 TTGATGATCCAGCGGTCGTCGGCCGGGTCGATGTTGGTCTGGGCGCCCAGCTCGAAGCCA 224639 Query 34471 AAGTACTTTGTCGGGTAAATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTG 34530 |||||||| | |||| | || || | || | || ||||| || || ||| Sbjct 224640 AAGTACTTGATGAGGTACGCACCGGGGCGGGCCAGAGACTGGGCGACGCTGGTCAGATTG 224699 Query 34531 ACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGG--CGCAGATGCGCGGCA 34588 || ||| ||||||||||||||||| || ||||||| ||||| ||||| ||| || Sbjct 224700 GTGACGACCGTCTTGATGCCGTTGCCTTTGCCTTCGATCTTGGTCTGCAGA--CGCTCCA 224757 Query 34589 TTTTGTAGCGGTAGAACGCGTCCGCCACATTGCG 34622 | |||||||||||||| ||||||| |||| ||| Sbjct 224758 TCTTGTAGCGGTAGAAGACGTCCGCGACATCGCG 224791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841197479440