Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Graphilbum_20fragrans_20[genbank_20GCA_5F001513895.1_202016-01-13] 80 sequences; 34,270,891 total letters Query= NC_022563.1 Length=148803 Score E Sequences producing significant alignments: (Bits) Value seq31 87.8 2e-12 >seq31 Length=224113 Score = 87.8 bits (96), Expect = 2e-12 Identities = 146/204 (72%), Gaps = 8/204 (4%) Strand=Plus/Plus Query 117472 ACCGACGAGCCCTACGAGGCCAAGGTCTTCTTCGGCCCGCTCTACTACCTGCGGCTGCGC 117531 |||| |||||| ||||||| | |||||| ||| || ||||||||| ||| || Sbjct 199066 ACCGGCGAGCCGCTCGAGGCCTACGTCTTCAACGGGCCCATCTACTACCAGCGCCTCAAG 199125 Query 117532 CACCTGACGCAGGACAAGGC-CACCGTC-CGCTGCC--GGGGCAAGAAGACCAAGCTCAT 117587 ||| || ||||||||| ||| || ||| ||| ||||| | ||| |||| Sbjct 199126 CACATGGTCCAGGACAAGATGCAC--TCGCGC-GCCAAGGGGCCGCGCG-CCATCCTCAC 199181 Query 117588 CCGGCAGGCCAACGAGGGCCGCAAGCGCGGGGGCGGCATCAAGTTCGGGGAGATGGAGCG 117647 ||| ||| ||| |||||||||| |||| |||||| | |||| ||||||||||| Sbjct 199182 CCGCCAGCCCACCGAGGGCCGCTCCCGCGACGGCGGCCTGCGCCTCGGCGAGATGGAGCG 199241 Query 117648 GGACTGCATCATCGCGCACGGCGC 117671 |||||| ||||||| ||||||| Sbjct 199242 CGACTGCCTCATCGCCTACGGCGC 199265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476041123958400