Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Graphilbum_20fragrans_20[genbank_20GCA_5F001513895.1_202016-01-13] 80 sequences; 34,270,891 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 9e-11 >seq1 Length=2664519 Score = 82.4 bits (90), Expect = 9e-11 Identities = 203/300 (68%), Gaps = 6/300 (2%) Strand=Plus/Minus Query 147106 ACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTC-CGCGG 147163 ||||| ||||| ||| | ||||| ||||| |||||||||||| ||||| || ||| | Sbjct 1365156 ACGTAGAACTGAGCAAAC-ATGTGACACGGTGGCAGCGCCATGCTAGGCAGATCTCGC-G 1365099 Query 147164 GGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAA 147223 | ||||| || || | | | ||| | | | | ||||| || || || | || | Sbjct 1365098 GATTCCAAGCTGAAAGGAGGATCCGGCGGTTGTAGGGGTCTGTCCGAAGCTTGTGTATCA 1365039 Query 147224 CCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTC-CCGCAGTCCACGTACCTG 147282 | || ||| || || ||||| ||| ||||| ||| ||| || || || | Sbjct 1365038 CGTCGGCCAACTGATCAACACCCTGACCCGTGTAGTCCGTCTTTGCA-TCTACATATTCG 1364980 Query 147283 GCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGC 147342 || || ||||||| |||||| |||||||| || || |||||||| ||| | | ||| Sbjct 1364979 GCACCGAAGTGCCGCCACTGAAAGCCGTAGACAGGTCCCAGGTCACCGACTTCACGGTGA 1364920 Query 147343 GAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCC 147402 || || || | | | ||| || ||| | || || | | ||||||| || ||||||| Sbjct 1364919 GACAACCCGACGCTGTCGAGGAATTCGCGCGATCCATTGCCGTCCCATATCTTCACTCCC 1364860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487416512000