Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Graphilbum_20fragrans_20[genbank_20GCA_5F001513895.1_202016-01-13] 80 sequences; 34,270,891 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq13 93.3 3e-14 >seq13 Length=672118 Score = 93.3 bits (102), Expect = 3e-14 Identities = 133/181 (73%), Gaps = 6/181 (3%) Strand=Plus/Minus Query 48510 CGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGTGACAAGTTTGCGTC-CT 48568 |||||||||| || || | || ||| | ||| |||| || |||||||||||||| | Sbjct 570791 CGTCAAGGTGCGGGTGCGCACGACCAAGATCCCGCAGATCGGCGACAAGTTTGCGTCGCG 570732 Query 48569 TCACGGCGCAAAAGGGGAC-ATGTG-GAGCCGTCCTGACCCAGGAGGACATGCCCTTCGA 48626 ||||| ||||||||| || || | | | ||| | | || || ||||||||||| Sbjct 570731 CCACGG-GCAAAAGGGCACCATCGGCGTGACGTACCGCTCC--GAAGACATGCCCTTTAC 570675 Query 48627 CAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATGAC 48686 || ||| || | ||||||| ||||||||||||| |||||| | ||||| | ||||| Sbjct 570674 CACGGAGGGCATCACGCCCGACATCATCATCAACCCGCACGCCATCCCCTCGCGCATGAC 570615 Query 48687 C 48687 | Sbjct 570614 C 570614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369506839730480