Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Graphilbum_20fragrans_20[genbank_20GCA_5F001513895.1_202016-01-13] 80 sequences; 34,270,891 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq18 87.8 3e-12 >seq18 Length=496665 Score = 87.8 bits (96), Expect = 3e-12 Identities = 348/544 (64%), Gaps = 14/544 (3%) Strand=Plus/Plus Query 76598 ACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGT 76657 || || ||||| || |||||||||||||| ||||| || || ||||| |||| | Sbjct 377655 ACGCGCTTCATGAACAGATCAGGTATCCACAGAGCCATGAACAGATCACGGGCGCGGATC 377714 Query 76658 TCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGT 76717 || || || || ||||| || || |||||||| | | || | ||||| || Sbjct 377715 TCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGGAACTCAAAGACGTCGGCGTGCCACGGC 377774 Query 76718 TCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCA 76777 || || || || | | | || || || || || || ||||| || | || | || Sbjct 377775 TCCAGGTAGATGCAGAAAGCGCCGGGGCGCTTGTTTCCGCCCTGGTCGACGTAGCGAGCC 377834 Query 76778 GTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAA 76837 ||||| || | || | || ||| || || |||||||| || || || || || || | | Sbjct 377835 GTGTTGTTGAAGACGCGCAGCATGGGGATGATGCCGTTGGAGGTGCCGTTGGTGCCGGCA 377894 Query 76838 ATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTA 76897 || || ||| ||||| || || ||||| || || || ||| | || Sbjct 377895 ATGTAGGATCCTGTGGCACGGATGCGGTGTATGTTGAGGCCAATGCCGCCAGCCGTCTTG 377954 Query 76898 GAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATG 76957 || || | |||||| || | ||||| || |||||||| || || || ||| | ||| Sbjct 377955 GAAATCATGGCACAGGTCTTGAGGGTGTCGTAAATGCCCTCGATGCTGTCGTCCTTGATG 378014 Query 76958 TTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGA 77017 | | || || || |||| ||| || || || || || || | || || Sbjct 378015 TCGACCAGGAAGCACGACGACAGCTGAGCCTGCGGCGTACCGGCGTTGAAAAGCGTGGGT 378074 Query 77018 GATGCATGAGTGAACCATTTTTCAGA-AAGTAGATTGTATGTTTCAATAACTGCTTCTAT 77076 || || |||||||| | || || | |||| ||||| || || ||||| || | Sbjct 378075 GAGGCGTGAGTGAAGGACTTGCTGGACATGTAG-TTGTAGGTCTCCATAACACGCTCGAC 378133 Query 77077 AT------CCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTC 77130 || |||| |||| || ||||| || ||||| | ||| |||||||| || || Sbjct 378134 ATTGTCGCCCCA--GATG----CCCACAGCCACGCGCATAATCATGTGCTGAGGCCGCTC 378187 Query 77131 TACA 77134 ||| Sbjct 378188 AACA 378191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933687065600