Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grosmannia_20penicillata_20[genbank_20GCA_5F001938055.1_202017-01- 06] 199 sequences; 26,334,062 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq177 136 5e-27 >seq177 Length=580736 Score = 136 bits (150), Expect = 5e-27 Identities = 473/722 (66%), Gaps = 26/722 (4%) Strand=Plus/Minus Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010 ||||||||||| || | | | ||| || || || |||| || ||||| | || | Sbjct 526650 TCAAACTCGTCGCCGTAGCAGTCGGCCAGGCCGGGGCACTCATTGGGGCACATGAGCGTC 526591 Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 54070 || || |||| || ||| || ||||| || ||||| || ||||| || || | || Sbjct 526590 CATTCGCCGTTCCTCTCCACACGCTTCATGAACAGATCGGGGATCCAGAGCGCCAGGAAA 526531 Query 54071 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 54130 ||||| | | | ||||| || || ||||| |||||||| ||| | | Sbjct 526530 AGATCGCGTGCGCGGATCTCCTCCTTGCCATGGTTCTTGCGGAGATCGAGAAACTCAAAC 526471 Query 54131 ATATCAGAATGCCACGGTTCCAAGTATATGGTCATAA--CTCCAGGCCGTTTGTTTCCTC 54188 | || | |||||||| |||| ||| ||| || || | ||||| || ||||| || | Sbjct 526470 ACGTCGGCGTGCCACGGCTCCAGGTAGATG--CAGAACGCGCCAGGGCGCTTGTTGCCAC 526413 Query 54189 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGG 54248 |||| || | ||| | |||||||| || || || | || ||| || | ||||| |||| Sbjct 526412 CCTGGTCAACGTAGCGGGCGGTGTTGTTGTAGACACGCAGCATGGGCACGATACCGTTGG 526353 Query 54249 ATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAG 54306 | | || ||||| |||| || ||| || |||||||||| || ||| || Sbjct 526352 AGGTGCCGTTGGTGCCGGCAATGTAGGAGCCCGTGGCACGAATGCGGTGAACGTTG--AG 526295 Query 54307 ACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTATCATAGATGC 54365 || || || || || | || ||||| | ||||| ||| || | || || ||||||| Sbjct 526294 GCCAATGCCACCGGCGGTCTTGGAGATCATGGCGCA-CGTCTTGAGGGTGTCGTAGATGC 526236 Query 54366 CCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC-GACTA 54424 |||| || || || ||| |||||| || || || || |||| | ||| | | Sbjct 526235 CCTCAATGCTGTCGTCCTTCATGTCAACCAGGAAGCACGAGGACAGCT-GTGCCTGCGGG 526177 Query 54425 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA-AAGTAGATT 54483 || || || || || | ||| || || ||||| || || | || | || | |||| || Sbjct 526176 GTGCCGGCGTTGAAGAGGGTGGGCGAGGCGTGGGTGAAGAACTTGTTGGACATGTAG-TT 526118 Query 54484 GTACGTCTCGA----TAGCT-GA-GTCTATATCCCATTGATGAATTCCTACTGCGACACG 54537 ||| ||||| | ||| || ||| |||| |||| || || || || || Sbjct 526117 GTATGTCTCAACGACGCGCTCGACGTCGTCGCCCCA--GATG----CCGACAGCCACGCG 526064 Query 54538 CATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTT 54597 ||| | ||||||||| || | || || |||||| || | ||||||| ||| || Sbjct 526063 CATGATCATGTGCTGTGGGCGCTCGACAATCTTGCCGTCGAGCTTCAGCAGGTACGAGCG 526004 Query 54598 TTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGA 54657 ||| | || || || || || || | ||| ||||| || ||||| | ||| | || Sbjct 526003 TTCGAGGGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCGCGATCGTAGACAATGGCCGA 525944 Query 54658 GT 54659 || Sbjct 525943 GT 525942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593720123117520