Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Grosmannia_20penicillata_20[genbank_20GCA_5F001938055.1_202017-01-
06] 199 sequences; 26,334,062 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq140 116 4e-21
seq120 111 2e-19
seq164 109 6e-19
>seq140
Length=206242
Score = 116 bits (128), Expect = 4e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || ||||| || | || || || | || || |||||||| ||||||||
Sbjct 138149 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAA 138208
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || ||||||||||||| ||| | || |||||||||| ||| || |||| |
Sbjct 138209 GATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 138268
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | |||||| || ||||| || | ||||| || |||||||| || ||||| ||
Sbjct 138269 GTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGAC 138328
Query 43172 AAAGATTTGCAT 43183
|||||| |||||
Sbjct 138329 AAAGATCTGCAT 138340
>seq120
Length=316173
Score = 111 bits (122), Expect = 2e-19
Identities = 135/184 (73%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || ||||| || | |||||| || |||| || |||||||| || |||||
Sbjct 164137 CTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 164196
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || ||||||||||| | ||| | || |||||||||| ||| || |||| |
Sbjct 164197 AATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 164256
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | |||||| || || || |||| |||||||| |||||||| || ||||| ||
Sbjct 164257 GTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCAC 164316
Query 43172 AAAG 43175
|||
Sbjct 164317 GAAG 164320
>seq164
Length=135798
Score = 109 bits (120), Expect = 6e-19
Identities = 156/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||| | ||||| |||| ||| |||||| || |||||||| || | || || || |
Sbjct 112447 ACGAAGCACCAGGTGCAGCGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTACGGCC 112388
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
||| || |||||||| || || || || | ||||||||||||| || | || ||||||
Sbjct 112387 GTCCTCAAGCTGCTTGCCCGCAAAGATCAAGCGCTGCTGGTCGGGGGGAATGCCCTCCTT 112328
Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146
|||| ||| || |||| ||| | | | |||||| || || || || | || |
Sbjct 112327 GTCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAGGACTCAACCTCAAGGGTAA 112269
Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|||| |||||||| || ||||| || ||||| |||||
Sbjct 112268 TGGTCTTGCCCGTCAGAGTCTTCACGAAGATCTGCAT 112232
Score = 107 bits (118), Expect = 2e-18
Identities = 141/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| ||||| ||||| || | || || || |||| || |||||||| ||||| ||
Sbjct 112651 CTCCTTCTGAATGTTGTAGTCTGAGAGCGTGCGGCCGTCCTCCAGCTGCTTTCCAGCAAA 112592
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110
|| | ||||||||||||| ||| | || |||||||||| ||| | || | || |
Sbjct 112591 GATCAAGCGCTGCTGGTCGGGCGGAATGCCCTCCTTGTCC-TGAATCTTCGACTTCACAT 112533
Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
| | | |||||| || || || || | |||||| || |||||||| || ||||| |
Sbjct 112532 TGTCGATTGTGTCGGAAGACTCAACCTCCAGCGTGATCGTCTTGCCCGTGAGGGTCTTGA 112473
Query 43171 CAAAGATTTGCAT 43183
| ||||| |||||
Sbjct 112472 CGAAGATCTGCAT 112460
Score = 104 bits (114), Expect = 3e-17
Identities = 157/218 (72%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||||| |||||| || | || |||||| ||||| ||||| || | || || || |
Sbjct 112903 ACGCAGCACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAAAGCGTGCGGCC 112844
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
||| || | |||||| || ||||| || || ||||||||||| | ||| | || ||||||
Sbjct 112843 GTCCTCCAACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCTGGCGGGATGCCCTCCTT 112784
Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTG 43145
|||| ||| | || | |||| ||| | | | |||||| || || || || | |||
Sbjct 112783 GTCC-TGAATCTTGGACTTGA-CGTTGTCAATGGTGTCGGAAGACTCGACCTCTAGCGTA 112726
Query 43146 ATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| || ||||| || || || || || ||||| |||||
Sbjct 112725 ATTGTCTTGCCAGTAAGGGTTTTGACGAAGATCTGCAT 112688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571816177603720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |