Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Grosmannia_20penicillata_20[genbank_20GCA_5F001938055.1_202017-01-
06] 199 sequences; 26,334,062 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq196 134 3e-26
seq125 86.0 1e-11
>seq196
Length=68970
Score = 134 bits (148), Expect = 3e-26
Identities = 277/408 (68%), Gaps = 22/408 (5%)
Strand=Plus/Plus
Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060
|| || ||| |||| ||| | || || ||||| || || ||||| || |||||||| ||
Sbjct 31919 CTCCCGCATATGCTGTTCTATGGCCCGCCCGGCACCGGAAAGACATCGACCATCCTCGCC 31978
Query 254061 CTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCT 254120
|| ||| ||||| ||| | |||| | |||||||| ||||||||||||||
Sbjct 31979 CTCGCCAAGGAGCTGTTCGGCCCCAAGTTCATGCGCGAGCGCGTCCTCGAGCTGAACGCG 32038
Query 254121 TCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGA-CTTT------------ 254167
|| ||||| ||||| | | | || || |||||| |||||| ||||
Sbjct 32039 TCCGACGAGCGCGGCATCTCCATTGTGCGGGACAAGGTCAAGAACTTTGCGCGCATGCAG 32098
Query 254168 CTC--CAA---GATGTC-GATTTCGTCGTTC-CAACCCGGCTGTCCGCCTTTCAAGCTCG 254220
||| ||| | || | || | | | | | |||| ||| ||||| || |||||
Sbjct 32099 CTCGTCAACCCGCTGCCCGAGTACAAGGAGCGCTACCC--CTGCCCGCCCTTTAAGCTGA 32156
Query 254221 TGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGA 254280
| | || |||||||| ||| |||||||| ||||| ||| ||| || ||||| || |
Sbjct 32157 TCGTGCTCGACGAGGCCGACTCCATGACGCAGGACGCCCAGAGCGCGCTGCGCCGGACCA 32216
Query 254281 TGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCA 254340
||||||| || | | ||||| || ||||| | ||||||||||| || ||||
Sbjct 32217 TGGAGACCTACAGCAAGATCACGCGCTTCTGCCTCATCTGCAACTACGTCACGCGCATCA 32276
Query 254341 TCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCAGCACCCTCG 254388
||| ||||||||| || ||| |||||| || |||| | |||||
Sbjct 32277 TCGACCCGCTGGCCAGCCGCTGCAGCAAGTTCCGCTTCAAGAGCCTCG 32324
>seq125
Length=289027
Score = 86.0 bits (94), Expect = 1e-11
Identities = 119/167 (71%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060
|| || ||| |||| | | || || || ||||| |||||||| || ||||||||||||
Sbjct 163964 CTGCCACATCTGCTGCTGTATGGGCCGCCGGGAACGGGCAAGACATCGACCATCCTGGCG 163905
Query 254061 CTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCT 254120
||||| || | | | || | || || | | || ||||| |||||||||||
Sbjct 163904 CTGGCACGGAAGATCTACGGGGCGGACAATGCGCGGCAGATGGTGCTGGAGCTGAACGCG 163845
Query 254121 TCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTT 254167
|| ||||| || || | ||||| || ||||| |||||||||| ||
Sbjct 163844 TCGGACGACCGTGGCATTGACGTGGTGCGCGAGCAGATCAAGACGTT 163798
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073763662231232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |