Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grosmannia_20penicillata_20[genbank_20GCA_5F001938055.1_202017-01- 06] 199 sequences; 26,334,062 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq164 129 5e-25 seq140 114 1e-20 seq120 102 6e-17 >seq164 Length=135798 Score = 129 bits (142), Expect = 5e-25 Identities = 155/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 45127 TACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTC 45186 ||| | ||| |||||| ||||||||||||||||||||| || ||| |||| || Sbjct 112669 TACTAGGTGGAGCGTGGACTCCTTCTGAATGTTGTAGTCTGAGAGCGTGCGGCCGTCCTC 112610 Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGC 45246 ||| || ||||| || || ||||| ||||| |||||||| || | |||||||||||| Sbjct 112609 CAGCTGCTTTCCAGCAAAGATCAAGCGCTGCTGGTCGGGCGGAATGCCCTCCTTGTCCTG 112550 Query 45247 AATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 ||| || ||| || | | |||| | ||| ||||||| || |||||||| Sbjct 112549 AATCTTCGACTTCACATTGTCGATTGTGTCGGAAGACTCAACCTCCAGCGTGATCGTCTT 112490 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 |||||| || ||||| || ||||| |||||| Sbjct 112489 GCCCGTGAGGGTCTTGACGAAGATCTGCATG 112459 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| |||||||||| ||||||||| || ||||||||| || || |||| || Sbjct 112440 ACCAGGTGCAGCGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTACGGCCGTCCTCA 112381 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || ||||| ||||| |||||||| || | |||||||||||| Sbjct 112380 AGCTGCTTGCCCGCAAAGATCAAGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 112321 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| ||| ||||| | |||||| |||||| Sbjct 112320 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCAACCTCAAGGGTAATGGTCTTG 112261 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 ||||||||||||||||| ||||| |||||| Sbjct 112260 CCCGTCAGAGTCTTCACGAAGATCTGCATG 112231 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || |||||||||||||||||||||| || ||| |||| ||| Sbjct 112896 ACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAAAGCGTGCGGCCGTCCTCC 112837 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | || || |||||||| || | ||||| ||||| || || | |||||||||||| | Sbjct 112836 AACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGA 112777 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | ||| ||||| | ||||| |||||| Sbjct 112776 ATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCGACCTCTAGCGTAATTGTCTTG 112717 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || || || || ||||| ||||| Sbjct 112716 CCAGTAAGGGTTTTGACGAAGATCTGCAT 112688 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 ||||| || ||||||||| |||||||||||| || || | || ||||| || Sbjct 112206 TGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTACGGCCATCTTCCAGCTGC 112147 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 || || || || || | ||||| || || || || | |||||||||||| || || Sbjct 112146 TTGCCCGCAAAAATGAGGCGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTG 112087 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 ||| || | | | |||| | ||||||||| | ||| || |||||||| ||| Sbjct 112086 GACTTGACATTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCGGTC 112027 Query 45314 AGAGTCTTCACAAAGATTTGCATGTTG 45340 || ||||| || || || |||||| || Sbjct 112026 AGGGTCTTGACGAAAATCTGCATGATG 112000 >seq140 Length=206242 Score = 114 bits (126), Expect = 1e-20 Identities = 148/203 (73%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| |||||||||||| || ||| | || ||||| || || || ||||| Sbjct 138149 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAA 138208 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 |||| ||||| |||||||| || | |||||||||||| || || ||| || Sbjct 138209 GATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 138268 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | |||| | ||||||||| | ||| || ||||||||||| || ||||| || Sbjct 138269 GTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGAC 138328 Query 45325 AAAGATTTGCAT-GTTGCCTCAA 45346 |||||| ||||| | ||||| || Sbjct 138329 AAAGATCTGCATGGCTGCCTAAA 138351 >seq120 Length=316173 Score = 102 bits (112), Expect = 6e-17 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || || ||||||||| |||||||||||| ||| ||| |||| || Sbjct 164120 ACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCGTCCTCG 164179 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| |||| ||||| ||||| || || | |||||||||||| Sbjct 164180 AGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGG 164239 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | ||||| ||| ||||| | ||| || |||||| Sbjct 164240 ATCTTGGACTTGACATTGTCAATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTG 164299 Query 45308 CCCGTCAGAGTCTTCACAAAG 45328 ||||| || |||||||| ||| Sbjct 164300 CCCGTGAGGGTCTTCACGAAG 164320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074241819179