Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grosmannia_20penicillata_20[genbank_20GCA_5F001938055.1_202017-01- 06] 199 sequences; 26,334,062 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq177 201 2e-46 seq124 123 4e-23 >seq177 Length=580736 Score = 201 bits (222), Expect = 2e-46 Identities = 396/578 (69%), Gaps = 6/578 (1%) Strand=Plus/Plus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866 || ||||||| | ||| || | ||||| ||||| | | ||||| | | || Sbjct 526340 ACCAACGGCACCTCCAACGGTATCGTGCCCATGCTGCGTGTCTACAACAACACCGCCCGC 526399 Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926 |||||| ||||| ||||| || || || ||||| | | ||||| |||| || ||| Sbjct 526400 TACGTTGACCAGGGTGGCAACAAGCGCCCTGGCGCGTTCTGCATCTACCTGGAGCCGTGG 526459 Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986 ||||| ||||| ||||| ||| |||| | ||||| ||| |||| || ||| || Sbjct 526460 CACGCCGACGTGTTTGAGTTTCTCGATCTCCGCAAGAACCATGGCAAGGAGGAGATCCGC 526519 Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGAC 97046 || | || | || || |||||| | || ||| ||||||||||||| || | || Sbjct 526520 GCACGCGATCTTTTCCTGGCGCTCTGGATCCCCGATCTGTTCATGAAGCGTGTGGA-GAG 526578 Query 97047 GGT-GGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGG 97105 | ||| | |||| || ||||||||| | || ||||| ||| |||| |||| || Sbjct 526579 GAACGGCGAATGGACGCTCATGTGCCCCAATGAGTGCCCCGGCCTGGCCGACTGCTACGG 526638 Query 97106 CGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATA-CGTGAGACGAG 97164 ||| ||||||||||| |||| | |||||| |||||||| ||| ||| || Sbjct 526639 CGACGAGTTTGAGGCTCTGTACGAGCAGTACGAGGCTGAGGGCCGCGGTCGTAAGAAGA- 526697 Query 97165 TCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCG 97223 || | || | |||| || ||| | ||||| | ||| ||| ||||| || | ||| Sbjct 526698 TCAAGGCCC-AGAAGCTATGGTATGCCATTCTCGAGGCGCAGACGGAGACGGGCAACCCG 526756 Query 97224 TACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATC 97283 | ||| ||||||||||| | || ||||| |||||||| || ||||||||||| Sbjct 526757 TTCATGCTCTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATC 526816 Query 97284 AAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTT 97343 ||||||| ||||||||||| ||||| |||||| | | ||||||||| || || Sbjct 526817 CGCAGCTCCAACCTGTGCACGGAGATTGTCGAGTACTCTGCGCCGGACGAGGTTGCTGTC 526876 Query 97344 TGCGTTCTGGCATCGGTCAATCTGCCCAAGTTTGTAGA 97381 ||| ||||| ||| | ||||| |||||| || Sbjct 526877 TGCAACCTGGCGTCGTTGGCGCTGCCGGCGTTTGTGGA 526914 >seq124 Length=298949 Score = 123 bits (136), Expect = 4e-23 Identities = 342/517 (66%), Gaps = 23/517 (4%) Strand=Plus/Minus Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420 || || || |||||| | |||| | | |||||| ||| |||||| | | ||| Sbjct 236736 ATCCGCAAGAAGGCTGATTGGGCTCTCCACTGGATCTCGGACCGCAAGTCCACCTTTGCC 236677 Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480 | | || || || || || ||||| ||||||||||| || || ||| || || Sbjct 236676 CAGCGCCTCGTTGCCTTTGCTGCCGTTGAGGGCATCTTTTTCAGCGGCGCTTTCTCGTCC 236617 Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540 ||||||||||| |||||||| || || ||||| || ||||| | |||||| | || Sbjct 236616 ATCTTTTGGCTGAAGAAGCGTGGCCTGATGCCTGGCCTGACTTTCTCGAACGAGCTGATC 236557 Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT--ATCTG 125597 || || ||||||||||| ||| ||||| || || |||| || || || | | Sbjct 236556 TCGCGTGACGAGGGCCTGCACACCGACTTCGCTTGCCTGTTGTTCTCCCACCTTGAGCAC 236497 Query 125598 CGTCCC-GAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAG 125656 || ||| | |||||| | ||| || || ||||| |||||| || | Sbjct 236496 CGCCCCAGCAAGCAGAT----TGTTGAGAA------CATTATTGT---CGATGCGGTCAA 236450 Query 125657 GATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAA 125716 ||| || || ||||| || || || | || ||| | | || | |||||||||| | Sbjct 236449 GATCGAGCAGGAGTTCCTGACGGAGGCTCTGCCGTGCGCCCTGCTCGGCATGAACTCGAC 236390 Query 125717 GCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC-- 125774 || ||| ||||||| |||||||| || || || || ||| || | ||| Sbjct 236389 CCTGATGAAGCAGTACATTGAGTTTGTTGCTGACCGCCTGCTGGTCG---CCCTCGGCAA 236333 Query 125775 CG-CAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGG 125833 || ||| | ||| |||| || ||||| || |||||| | ||| || || | || Sbjct 236332 CGAGAAGGTGTACCGTGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGCGG 236273 Query 125834 TAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870 ||||||||||| || |||||| |||| |||| ||| Sbjct 236272 CAAGACCAACTTCTTTGAGAAGCGGGTCGGCGACTAC 236236 Score = 114 bits (126), Expect = 2e-20 Identities = 202/290 (70%), Gaps = 6/290 (2%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||| |||| ||||| ||||||| ||| ||| |||| ||| Sbjct 237142 ATCTGGCAGATGTACAAGAAGCACGAGGCTTCCTTCTGGACGGCCGAGGAGATCGACCTG 237083 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||||||| || |||| ||| | || |||| || |||||| ||| | ||| Sbjct 237082 TCCAAGGACATGCACGACTGGACCAACCGCCTGACCGACGATGAGCGCTTCTTTGTGTCG 237023 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198 ||||| |||||||||| || | ||| || || || |||||||| || ||| | || Sbjct 237022 CACATCCTGGCCTTCTTCGCGGCCTCGGACGGCATTGTCAACGAGAACCTGATCGAGCGC 236963 Query 125199 TTCTCTCAAGAGTTGACCA--TTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATG 125255 ||| ||| | ||| | || |||| ||| ||||| || || || || | |||| Sbjct 236962 TTCAGCGCCGAG--GTCCAGGTCCCGGAGG-CTCGCTGCTTCTATGGCTTTCAGACCATG 236906 Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305 || |||||| | ||||| || | ||||| || || |||| ||||| Sbjct 236905 ATGGAGAACATTCACTCCGAGACATACTCGCTGCTCATCGACACCTACAT 236856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057356615240