Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grosmannia_20penicillata_20[genbank_20GCA_5F001938055.1_202017-01- 06] 199 sequences; 26,334,062 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq164 95.1 1e-14 >seq164 Length=135798 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCT 48575 ||| || ||||| || |||||| ||||||||||| || | || || || |||||| Sbjct 112897 CACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTC-GGAAAGCGTGCGGCCGTCCT 112839 Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635 ||| |||||| ||| || |||| | ||||||||| || ||| | | ||||||||| Sbjct 112838 CCAACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCT 112779 Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695 ||| || ||||| | ||||| |||| |||||| ||| | || || || | Sbjct 112778 GAATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCGACCTCTAGCGTAATTGTCT 112719 Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 | || || || ||||| || || |||||||| Sbjct 112718 TGCCAGTAAGGGTTTTGACGAAGATCTGCAT 112688 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGT 48593 |||||| || |||||||| || | || || || | || ||||||||||| || | Sbjct 112195 CTCCTTCTGGATGTTGTAGTCGGA-AAGGGTACGGCCATCTTCCAGCTGCTTGCCCGCAA 112137 Query 48594 AAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAG 48653 |||| | ||||||||||| || | | ||||||||| || || ||||| | Sbjct 112136 AAATGAGGCGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACAT 112077 Query 48654 ACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCA 48713 | ||||| |||| ||||||| ||||| || ||||| || ||||| || || || | Sbjct 112076 TGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGA 112017 Query 48714 CAAAAATCTGCAT 48726 | ||||||||||| Sbjct 112016 CGAAAATCTGCAT 112004 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| ||||||| | | |||| || || ||| |||||| ||||||||||| || | Sbjct 112687 ACCACCGCGCAGGCGGAGTACTAGGTGGAGCGTGGACTCCTTCTGAATGTTGTAGTCTGA 112628 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 | || |||||||||||||||| || | | || || |||||||| || ||| Sbjct 112627 GAGCGTGCGGCCGTCCTCCAGCTGCTTTCCAGCAAAGATCAAGCGCTGCTGGTCGGGCGG 112568 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | | ||||||||| ||| ||| ||| | | | || || |||| |||||| Sbjct 112567 AATGCCCTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATTGTGTCGGAAGACTCAAC 112508 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| | || || || || || ||||| || || || || |||||||| Sbjct 112507 CTCCAGCGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 112460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421250178334199