Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Grosmannia_20penicillata_20[genbank_20GCA_5F001938055.1_202017-01-
06] 199 sequences; 26,334,062 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq139 140 2e-28
seq31 82.4 5e-11
>seq139
Length=206440
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 3700 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 3759
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 3760 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 3794
>seq31
Length=23218
Score = 82.4 bits (90), Expect = 5e-11
Identities = 203/304 (67%), Gaps = 8/304 (3%)
Strand=Plus/Minus
Query 6187 ATGTGGCGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCG--CCAAGGTCGAGGG 6244
|||| | |||| ||||| |||||||| ||| ||| ||||| ||||| |||||||
Sbjct 11627 ATGTCACCGACGTCTTCTATCGCTACAAGATGGAGCG--TCTGCAGACCAAGATCGAGGG 11570
Query 6245 TAAGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCG--CTC 6302
||||| ||||| || || || || | |||| | | ||||| ||| |||
Sbjct 11569 CAAGGGCAACGGCATCAAGACGGTTGTCCCCAACCTCAGCAACGTCGCC--GGCCAACTC 11512
Query 6303 GGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAG 6362
| ||||| | | |||| | | || || || || | || || || || || || |
Sbjct 11511 GCCCGCCCCGGCGCCTATCTCATCAAGTACTTTGGCTTTGAGCTCGGTGCCCAAACCAAC 11452
Query 6363 TTTGATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAG 6422
|||||| |||| |||| ||| | ||||| | || | | |||||||||||
Sbjct 11451 ATTGATCCGCCCGACGACCGCTGGATCATCAACGGTGCCCACGATGCCCCCAAGCTGCAG 11392
Query 6423 GACTTACTTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAG 6482
|||| || |||||||| || ||||||||| || || | | ||| | ||||| |||
Sbjct 11391 GACTACCTCGACGGCTTCATCTCCAAGTTTGTTCTCTGCAAGAAGTGCAAGAACCCCGAG 11332
Query 6483 ACCG 6486
||||
Sbjct 11331 ACCG 11328
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334946387648369
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |