Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grosmannia_20penicillata_20[genbank_20GCA_5F001938055.1_202017-01- 06] 199 sequences; 26,334,062 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq164 125 2e-23 seq140 107 5e-18 >seq164 Length=135798 Score = 125 bits (138), Expect = 2e-23 Identities = 170/236 (72%), Gaps = 1/236 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| |||||||| || | || |||||||| | || || || ||||| || |||| Sbjct 112234 CATG-CCACCGCGCAGGCGCAGGACGAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGT 112176 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| || || || || ||||| | || || || || || || || ||||| ||| | Sbjct 112175 CGGAAAGGGTACGGCCATCTTCCAGCTGCTTGCCCGCAAAAATGAGGCGCTGCTGATCAG 112116 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || || || |||||||| || | || || || || || | ||| || | Sbjct 112115 GGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAAGACT 112056 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 | || ||||| ||||| ||||| |||||||| ||||||||||| |||||||| ||| Sbjct 112055 CCACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAAATCTGCATGATG 112000 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | ||||| || || | |||| || || || || || ||||| | | Sbjct 112686 CCACCGCGCAGGCGGAGTACTAGGTGGAGCGTGGACTCCTTCTGAATGTTGTAGTCTGAG 112627 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| ||||| || | || ||||| || ||||||| ||||| || || Sbjct 112626 AGCGTGCGGCCGTCCTCCAGCTGCTTTCCAGCAAAGATCAAGCGCTGCTGGTCGGGCGGA 112567 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || ||||| || |||| ||||| || || || | ||| || || || Sbjct 112566 ATGCCCTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATTGTGTCGGAAGACTCAACC 112507 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||||||||| || || || ||||||||||| |||||||| Sbjct 112506 TCCAGCGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 112460 Score = 123 bits (136), Expect = 6e-23 Identities = 170/235 (72%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||||||||| | ||| || || || | |||| || || |||||||| |||| Sbjct 112462 CATG-CCACCGCGGAGACGAAGCACCAGGTGCAGCGTGGACTCCTTCTGGATATTGTAGT 112404 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| ||| || || ||||| || | || || || || ||||||| ||||| || | Sbjct 112403 CGGAGAGGGTACGGCCGTCCTCAAGCTGCTTGCCCGCAAAGATCAAGCGCTGCTGG---T 112347 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 | ||| || || || || |||||||| || | || ||||| || || | ||| | Sbjct 112346 CGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAGG 112287 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || || || || || ||||| || ||||||||||| ||||| |||||||| Sbjct 112286 ACTCAACCTCAAGGGTAATGGTCTTGCCCGTCAGAGTCTTCACGAAGATCTGCAT 112232 >seq140 Length=206242 Score = 107 bits (118), Expect = 5e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || |||| || || || ||||| || ||||||| | Sbjct 138114 CCACCACGGAGGCGTAGCACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 138173 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || ||||||||||| ||||| || ||| Sbjct 138174 AGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGCGGG 138233 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | || || || || || | ||| || || || Sbjct 138234 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 138293 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || || || |||||||| || |||||||| Sbjct 138294 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACAAAGATCTGCAT 138340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179651392249922