Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grosmannia_20penicillata_20[genbank_20GCA_5F001938055.1_202017-01- 06] 199 sequences; 26,334,062 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq164 98.7 9e-16 seq140 95.1 1e-14 >seq164 Length=135798 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || |||||||| | || ||| | || || || || ||||| || || || || ||| Sbjct 112914 CCGCCGCGGAGACGCAGCACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAA 112855 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | || || ||||| || || || ||| | || | || |||||||| ||||| Sbjct 112854 AGCGTGCGGCCGTCCTCCAACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCTGGCGGG 112795 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 ||||| || || || ||||| || |||| || | || | |||||||||||||||||| Sbjct 112794 ATGCCCTCCTTGTCCTGAATCTTGGACTTGA-CGTTGTCAATGGTGTCGGAAGACTCGAC 112736 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || |||| || ||||| || || ||||| || || || ||||| Sbjct 112735 CTCTAGCGTAATTGTCTTGCCAGTAAGGGTTTTGACGAAGATCTGCAT 112688 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| || | || || |||||||| || || ||||| ||||| || || ||| Sbjct 112233 ATGCCACCGCGCAGGCGCAGGACGAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCG 112174 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| |||| || || || || | || | || ||||| || || Sbjct 112173 GAAAGGGTACGGCCATCTTCCAGCTGCTTGCCCGCAAAAATGAGGCGCTGCTGATCAGGG 112114 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || ||||| || || || || || || |||| || | ||||||||||||||| Sbjct 112113 GGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAAGACTCC 112054 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| || | || |||||||| || || || || ||||| ||||| Sbjct 112053 ACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAAATCTGCAT 112004 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| || | | ||||| || ||||| || ||||| || || || || || Sbjct 112689 ATACCACCGCGCAGGCGGAGTACTAGGTGGAGCGTGGACTCCTTCTGAATGTTGTAGTCT 112630 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || || |||| || ||||| || | ||||| || |||||||| ||| Sbjct 112629 GAGAGCGTGCGGCCGTCCTCCAGCTGCTTTCCAGCAAAGATCAAGCGCTGCTGGTCGGGC 112570 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 |||||||| || || || ||||| || || | || | |||||||||||||| Sbjct 112569 GGAATGCCCTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATTGTGTCGGAAGACTCA 112510 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || | ||| ||||| || || || || || || || ||||| Sbjct 112509 ACCTCCAGCGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 112460 >seq140 Length=206242 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| | | ||| || || || || || ||||| ||||| || || ||| | Sbjct 138114 CCACCACGGAGGCGTAGCACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 138173 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| ||| |||| || || || ||| | |||| || |||||||| ||||| Sbjct 138174 AGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGCGGG 138233 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 ||||| || || || || || || |||| || | ||||||||||||||| || Sbjct 138234 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 138293 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGC 45343 || || || | || ||||| || || || || ||||| || ||||| || Sbjct 138294 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACAAAGATCTGCATGGC 138343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002075642040