Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grosmannia_20penicillata_20[genbank_20GCA_5F001938055.1_202017-01- 06] 199 sequences; 26,334,062 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq164 109 5e-19 seq140 100 3e-16 >seq164 Length=135798 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| || || || || || |||||||| || || || | || Sbjct 112688 ATGCAGATCTTCGTCAAAACCCTTACTGGCAAGACAATTACGCTAGAGGTCGAGTCTTCC 112747 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || || || || || Sbjct 112748 GACACCATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCGCCAGACCAG 112807 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | || || ||||| || ||| ||||||| | | | || || || ||| Sbjct 112808 CAGCGTCTTATTTTCGCCGGCAAGCAGTTGGAGGACGGCCGCACGCTTTCCGACTACAAC 112867 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| ||||| ||||| || ||||||||| |||| | ||||| ||| Sbjct 112868 ATTCAGAAGGAGTCGACCCTTCACTTGGTGCTGCGTCTCCGCGGCGGC 112915 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || ||||| || || || | || Sbjct 112460 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACGCTGGAGGTTGAGTCTTCC 112519 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || ||||| || ||||| || || || || ||||| || Sbjct 112520 GACACAATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCGCCCGACCAG 112579 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||| || || ||||||||||| | | | ||||| || ||| Sbjct 112580 CAGCGCTTGATCTTTGCTGGAAAGCAGCTGGAGGACGGCCGCACGCTCTCAGACTACAAC 112639 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| ||||| || || || ||| | || | || ||||||| || Sbjct 112640 ATTCAGAAGGAGTCCACGCTCCACCTAGTACTCCGCCTGCGCGGTGG 112686 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || ||||| || || || || || || Sbjct 112232 ATGCAGATCTTCGTGAAGACTCTGACGGGCAAGACCATTACCCTTGAGGTTGAGTCCTCC 112291 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || ||||| || Sbjct 112292 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 112351 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||| || || ||||| ||||| | | | | || || || || Sbjct 112352 CAGCGCTTGATCTTTGCGGGCAAGCAGCTTGAGGACGGCCGTACCCTCTCCGACTACAAT 112411 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| || || || ||| ||||| | || | ||||| ||| Sbjct 112412 ATCCAGAAGGAGTCCACGCTGCACCTGGTGCTTCGTCTCCGCGGTGGC 112459 >seq140 Length=206242 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || ||||| || || || || || | || Sbjct 138340 ATGCAGATCTTTGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCC 138281 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || ||||| || Sbjct 138280 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAG 138221 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| || || || |||||||||||| | | | | || || || ||| Sbjct 138220 CAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTCTCCGACTACAAC 138161 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || ||||| || || || ||| | ||| Sbjct 138160 ATCCAGAAGGAGTCTACCCTTCACCTTGTG 138131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896480879720