Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grosmannia_20penicillata_20[genbank_20GCA_5F001938055.1_202017-01- 06] 199 sequences; 26,334,062 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq164 107 2e-18 seq140 87.8 2e-12 >seq164 Length=135798 Score = 107 bits (118), Expect = 2e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||||| || |||||| ||| || || ||||| || |||| || || || |||| || Sbjct 112441 CACCAGGTGCAGCGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTACGGCCGTCCTC 112382 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 |||||| ||||||||||| || | ||||||||||||| ||| | || ||| |||||| Sbjct 112381 AAGCTGCTTGCCCGCAAAGATCAAGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTG 112322 Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 ||| || |||| ||| | | | || ||| ||||| || || | || || | | Sbjct 112321 GATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAGGACTCAACCTCAAGGGTAATGGTCT 112263 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | |||||||| || || || ||||| ||||| Sbjct 112262 TGCCCGTCAGAGTCTTCACGAAGATCTGCAT 112232 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || || ||| || || || || || |||| ||| || || |||| || Sbjct 112897 CACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAAAGCGTGCGGCCGTCCTC 112838 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 | ||| ||||| || || ||||||||||||||||| | || | || ||| |||||| Sbjct 112837 CAACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTG 112778 Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 || || |||| ||| | | | || ||| ||||| || || | ||| || | | Sbjct 112777 AATCTTGGACTTGA-CGTTGTCAATGGTGTCGGAAGACTCGACCTCTAGCGTAATTGTCT 112719 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || || ||||| || ||||| ||||| Sbjct 112718 TGCCAGTAAGGGTTTTGACGAAGATCTGCAT 112688 >seq140 Length=206242 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||||| ||| | || || || ||| || || || || || |||| || || || | Sbjct 138125 GCGTAGCACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCC 138184 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 || || ||||| ||||| || || || || ||||||||||||| || | || ||| || Sbjct 138185 ATCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTT 138244 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 |||| ||| || |||| | | | || ||| |||||||| || | ||||| Sbjct 138245 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGAT 138304 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | | || ||||| || || || |||||||| ||||| Sbjct 138305 AGTCTTGCCCGTGAGGGTCTTGACAAAGATCTGCAT 138340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429544558217687