Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grosmannia_20penicillata_20[genbank_20GCA_5F001938055.1_202017-01- 06] 199 sequences; 26,334,062 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq164 107 1e-18 seq120 100 2e-16 >seq164 Length=135798 Score = 107 bits (118), Expect = 1e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||||||||| || |||||||| || || ||||| || | Sbjct 112460 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACGCTGGAGGTTGAGTCTTCC 112519 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || ||| ||||| || || | ||||| || || Sbjct 112520 GACACAATCGACAATGTGAAGTC-GAAGATTCAGGACAAGGAGGGCATTCCGCCCGACCA 112578 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| || || ||||| || || || ||||| |||| ||||| | || ||||| Sbjct 112579 GCAGCGCTTGATCTTTGCTGGAAAGCAGCTGGAGGACGGCCGCACGCTCTCAGACTACAA 112638 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 112639 CATTCAGAAGGAGTCCAC 112656 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||||| || || || || ||||| ||||| || || || | Sbjct 112004 ATGCAGATTTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTGGAGTCTTCC 112063 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || | || || ||||| || || | || || ||||| Sbjct 112064 GACACCATTGACAATGTCAAGTC-CAAGATCCAGGACAAGGAGGGCATCCCCCCTGATCA 112122 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || ||||| ||||| || |||||||| | || || | ||| ||||| Sbjct 112123 GCAGCGCCTCATTTTTGCGGGCAAGCAGCTGGAAGATGGCCGTACCCTTTCCGACTACAA 112182 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 112183 CATCCAGAAGGAGTCTAC 112200 >seq120 Length=316173 Score = 100 bits (110), Expect = 2e-16 Identities = 137/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 23620 TTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTT 23679 ||||| || ||||||||||| || || ||||| ||||| || || ||| ||||||| || Sbjct 164319 TTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACGATT 164260 Query 23680 GA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTT 23738 || ||| | || | || || ||||| || || | ||||| || || ||||| | Sbjct 164259 GACAATGTCAAGTC-CAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAGCAGCGCCT 164201 Query 23739 AATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAA 23798 || || |||||||| || || || |||| |||||| | ||| |||||||| || || Sbjct 164200 GATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTGTCCGACTACAACATCCAGAA 164141 Query 23799 AGAGTCCAC 23807 ||||| || Sbjct 164140 GGAGTCGAC 164132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008780221092