Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Grosmannia_20penicillata_20[genbank_20GCA_5F001938055.1_202017-01-
06] 199 sequences; 26,334,062 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq164 107 1e-18
seq120 100 2e-16
>seq164
Length=135798
Score = 107 bits (118), Expect = 1e-18
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||||||||| || |||||||| || || ||||| || |
Sbjct 112460 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACGCTGGAGGTTGAGTCTTCC 112519
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || ||| ||||| || || | ||||| || ||
Sbjct 112520 GACACAATCGACAATGTGAAGTC-GAAGATTCAGGACAAGGAGGGCATTCCGCCCGACCA 112578
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| || || ||||| || || || ||||| |||| ||||| | || |||||
Sbjct 112579 GCAGCGCTTGATCTTTGCTGGAAAGCAGCTGGAGGACGGCCGCACGCTCTCAGACTACAA 112638
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||||||
Sbjct 112639 CATTCAGAAGGAGTCCAC 112656
Score = 93.3 bits (102), Expect = 3e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || ||||| || || || || ||||| ||||| || || || |
Sbjct 112004 ATGCAGATTTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTGGAGTCTTCC 112063
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | || || ||||| || || | || || |||||
Sbjct 112064 GACACCATTGACAATGTCAAGTC-CAAGATCCAGGACAAGGAGGGCATCCCCCCTGATCA 112122
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| | || ||||| ||||| || |||||||| | || || | ||| |||||
Sbjct 112123 GCAGCGCCTCATTTTTGCGGGCAAGCAGCTGGAAGATGGCCGTACCCTTTCCGACTACAA 112182
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||| ||
Sbjct 112183 CATCCAGAAGGAGTCTAC 112200
>seq120
Length=316173
Score = 100 bits (110), Expect = 2e-16
Identities = 137/189 (72%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 23620 TTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTT 23679
||||| || ||||||||||| || || ||||| ||||| || || ||| ||||||| ||
Sbjct 164319 TTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACGATT 164260
Query 23680 GA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTT 23738
|| ||| | || | || || ||||| || || | ||||| || || ||||| |
Sbjct 164259 GACAATGTCAAGTC-CAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAGCAGCGCCT 164201
Query 23739 AATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAA 23798
|| || |||||||| || || || |||| |||||| | ||| |||||||| || ||
Sbjct 164200 GATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTGTCCGACTACAACATCCAGAA 164141
Query 23799 AGAGTCCAC 23807
||||| ||
Sbjct 164140 GGAGTCGAC 164132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338008780221092
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |