Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grosmannia_20penicillata_20[genbank_20GCA_5F001938055.1_202017-01- 06] 199 sequences; 26,334,062 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq164 141 2e-28 seq120 140 8e-28 seq140 138 3e-27 >seq164 Length=135798 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || || || || || || ||||||||||||||||| || ||| Sbjct 112007 CAGATTTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGAC 112066 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || ||||| ||||| |||||||| || || ||||| || || ||||| Sbjct 112067 ACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGATCAGCAG 112126 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || || || || ||||| |||||||| | || ||| |||| || ||| || Sbjct 112127 CGCCTCATTTTTGCGGGCAAGCAGCTGGAAGATGGCCGTACCCTTTCCGACTACAACATC 112186 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || |||||||| || Sbjct 112187 CAGAAGGAGTCTACCCTGCATCTCGT 112212 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| ||||| || || || || || ||||| ||||| || ||| ||| Sbjct 112235 CAGATCTTCGTGAAGACTCTGACGGGCAAGACCATTACCCTTGAGGTTGAGTCCTCCGAC 112294 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| || || || || || |||||||| Sbjct 112295 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAG 112354 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || || ||||| || || || | || || |||| || || || Sbjct 112355 CGCTTGATCTTTGCGGGCAAGCAGCTTGAGGACGGCCGTACCCTCTCCGACTACAATATC 112414 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || ||||| || || Sbjct 112415 CAGAAGGAGTCCACGCTGCACCTGGT 112440 Score = 123 bits (136), Expect = 6e-23 Identities = 151/205 (74%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||| || || || || || || || || ||||| || || ||| Sbjct 112691 CAGATCTTCGTCAAAACCCTTACTGGCAAGACAATTACGCTAGAGGTCGAGTCTTCCGAC 112750 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| |||||||||||||| || || ||||| || |||||||| Sbjct 112751 ACCATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCGCCAGACCAGCAG 112810 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| |||||||| || ||| | || || || | || ||| |||| || ||| | Sbjct 112811 CGTCTTATTTTCGCCGGCAAGCAGTTGGAGGACGGCCGCACGCTTTCCGACTACAACATT 112870 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 112871 CAGAAGGAGTCGACCCTTCA-CTTG 112894 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || |||||||| || ||||| || || ||| Sbjct 112463 CAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACGCTGGAGGTTGAGTCTTCCGAC 112522 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || |||||||||||||| || || || || || |||||||| Sbjct 112523 ACAATCGACAATGTGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCGCCCGACCAGCAG 112582 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || ||||| ||||| || || || | || || | || || ||| | Sbjct 112583 CGCTTGATCTTTGCTGGAAAGCAGCTGGAGGACGGCCGCACGCTCTCAGACTACAACATT 112642 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 112643 CAGAAGGAGTCCACGCTCCACCTAGT 112668 >seq120 Length=316173 Score = 140 bits (154), Expect = 8e-28 Identities = 151/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 |||||||| || ||||| || || || |||||||||||||| || ||| ||||| || Sbjct 164319 TTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACGATT 164260 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || || ||||| ||||| |||||||| || || ||||| || |||||||| || || Sbjct 164259 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAGCAGCGCCTG 164200 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109 || |||||||| || |||||||| || || | ||||| |||| || ||| |||| || Sbjct 164199 ATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACTCTGTCCGACTACAACATCCAGAAG 164140 Query 178110 GAATCAACACTGCATCTTGT 178129 || || || || || || || Sbjct 164139 GAGTCGACCCTCCACCTGGT 164120 >seq140 Length=206242 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || ||||| || || || |||||||| |||||||| || ||| Sbjct 138337 CAGATCTTTGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCCGAC 138278 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| |||||||| || || ||||| || |||||||| Sbjct 138277 ACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAGCAG 138218 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| || ||||| | || || |||| || ||| || Sbjct 138217 CGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTCTCCGACTACAACATC 138158 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || ||||| Sbjct 138157 CAGAAGGAGTCTACCCTTCACCTTGT 138132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203728130861606