Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202
012-11-26] 217 sequences; 28,364,325 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq127 91.5 3e-13
>seq127
Length=123883
Score = 91.5 bits (100), Expect = 3e-13
Identities = 276/420 (66%), Gaps = 10/420 (2%)
Strand=Plus/Minus
Query 282392 CACGATAGGTGTGATGAACTTCTTCAAGAAACCTGGAATTTCTAGGAGACTGGGAAAACA 282451
||| || ||||||||||||| | ||| || ||||| | || | ||||||||
Sbjct 50993 CACAATGGGTGTGATGAACTCGACGAGGAAGCCAGGAATCTTGAGTAAGCTGGGAAATTG 50934
Query 282452 GCTATGGAAAAAGTTCATGACAAGACCA--GAAATGTGAGTTCCGTCAACATCCGCGTCG 282509
|| || ||||| |||| ||||| || ||| ||| || || ||| ||
Sbjct 50933 TGCGTGCAAGAAGTTGATGAGCAGACCTTTGATATGGGAG--CCATCGTGGTCCTGATCA 50876
Query 282510 GTCATGATCATCACATGACCGTATCTCAGAGAAGAAGTGTCTTTGTACACTTTACCGGTT 282569
||||||||||| | ||||||||||| ||| |||||| | || ||||| |
Sbjct 50875 GTCATGATCATTAGATGACCGTATCGAAGACCTTTGGTGTCTGTATAGACTTTCTTGTGC 50816
Query 282570 TGAAGGCCCA-AAATTTGTTTGAGCGCGGTGATTTCTTCGTTCTTTGTGATACTTGCCAC 282628
|| ||||||| ||| || ||| | | || || | |||||| | ||| | |
Sbjct 50815 TGCAGGCCCAGAAAGTTCTTTATGTTTTG-AATCTCCTTGTTCTTCGAGATCTGATCGAT 50757
Query 282629 AGATGCATCGCGAACGTTCAGCAACTTACCGCGGAGAGGAAAAACACCATATCTCTCGCG 282688
|||||||| || ||||| ||||| ||||| | || ||||| ||||| || | |||
Sbjct 50756 GGATGCATCACGCACGTTGAGCAATTTACCTCTCAGGGGAAAGACACCCAATGTATCGGC 50697
Query 282689 ACCGACCACGGACAGTCCTGCAATTGCAA--GTGTTGCTGCGGAATCTCCCTCCGTCAAG 282746
|||||| || | | ||||| || || | ||| || || || ||||| ||||||
Sbjct 50696 ACCGACGACTGCACGGCCTGCCATAGCCATCCCCTTG--GCTGACTCACCCTCGGTCAAG 50639
Query 282747 ATGAGAGTACACATCTTACTATGATTTGTGCCCGCCCATGCAGCATCGTTTAGTTTAGGG 282806
|| || ||||| | | | || || ||||| ||| | ||||| | ||||| |||
Sbjct 50638 ATCAGCGTACAGAGATGGCCATTCTTGGTGCCTGCCAAGTTCGCATCTGTGAGTTTCGGG 50579
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057821058918710
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |