Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202
012-11-26] 217 sequences; 28,364,325 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq154 123 4e-23
>seq154
Length=71981
Score = 123 bits (136), Expect = 4e-23
Identities = 170/238 (71%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| ||| | || || || ||||||||||| ||||| | || | ||| || |
Sbjct 41246 ATGCAAATTTTTGTCAAAACTCTCACAGGCAAAACCATAACACTCGAAGTGGAATCATCT 41305
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| || ||| | || |||||| ||||| || |||||||| ||||| || ||
Sbjct 41306 GATACCATCGATAACGTTAAGTCGAAAATCCAAGACAAGGAAGGTATTCCACCAGACCAG 41365
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| || | || || ||||| ||||| | |||||| ||||||| || |||||| ||
Sbjct 41366 CAGCGGTTGATCTTCGCAGGCAAACAGCTGGAGGATGGTCGAACCTTGTCAGATTACAAC 41425
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
||||| ||||| || || |||| | || | | || |||||||| || ||| ||
Sbjct 41426 ATTCAGAAAGAGTCTACACTGCACCTTGTGCTGAGATTGCGAGGTGGCATGCAAATTT 41483
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755453950825600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |