Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202
012-11-26] 217 sequences; 28,364,325 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq123 217 2e-51
>seq123
Length=109856
Score = 217 bits (240), Expect = 2e-51
Identities = 1301/2064 (63%), Gaps = 47/2064 (2%)
Strand=Plus/Minus
Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898
|||||||| || || || || || | | || || ||||||||||| || || || |||
Sbjct 49205 GTGAATTGGATTGGCGCAGAAGCAGCCATGGTTCGAAGATAGTACATGCCAGTCTTGAGA 49146
Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 64958
|| | |||| || || |||||| || | ||| | || || | |
Sbjct 49145 CCCATTTTCCAGCCAGCGAAGTGCATAGAAGTGATCTTGCCCATGGTTGGTTCCTTCAGA 49086
Query 64959 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 65018
|| || |||| || || ||||| |||||||| || | || || ||||| | |||
Sbjct 49085 TGAATGTTCAACGACTGTGACTGATCAATGAAGGCACCTCGATCAGCGGCCATCTGGATG 49026
Query 65019 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 65078
|| || | || | || ||||| | ||| || || | | || || || ||||| |
Sbjct 49025 ATAGTTCTCTGAGAGATCTCCCAGACAGTCTTGTAGAGTGCTTTGATGTCGGTTGGAATG 48966
Query 65079 TTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 65135
|||| || |||||||| || || || || || || || || ||||| || | || |
Sbjct 48965 TTTGGTACGTTCTGAATTGAACCGCCCTCGGCAATGATTCTGTTCTTCATGTTGTCCGAC 48906
Query 65136 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 65195
|| | || | | || | || || ||||| || || |||||||| ||
Sbjct 48905 CACAGGCCAAGATCAACGAGATCTTTGAGCAGCCATGGATTGACGACCTGAAATTCGCCT 48846
Query 65196 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 65255
| || || | || | ||| || || ||||| || || | | |||||||| |||
Sbjct 48845 GCTAACACACGACGGGAGTAGATGTTGGATGTATATGGCTCGAAGCATTCATTATTGCCC 48786
Query 65256 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 65315
|| || || | || || || |||||||| ||||| || | | | ||||| || |||
Sbjct 48785 AATATCTGCGACGTAGAGGCGGTCGGCATGGGTGCGACAAGAAGAGAATTTCGAACACCA 48726
Query 65316 TA-TGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNN 65374
|| || | || || |||| | | ||||| | |||||| || | ||| |
Sbjct 48725 TACTGAGCA-ATCTTGGCTTTCAAGGCCTCCCAGTCCCAAAGGTCTGTTGGTGTCAGACC 48667
Query 65375 NNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGG 65434
||||| ||| | | | ||| || |||| || ||||||||
Sbjct 48666 CCAGAGGTCGTACTGTAGCTGACCTTGAGAAATGGGCGAGCCCTCATAGGTTTCGTATGG 48607
Query 65435 TCC---TTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTC 65491
|| ||||||| || || ||||| || | || ||| || || || ||
Sbjct 48606 ACCAAGTTCCTTCGCA---AGGTCACATGAAGCTGTCAGAGCTGCGTGGTAGATAGTCTC 48550
Query 65492 GAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAG-AA 65550
||| || | | || || | | |||||| | ||| || || | | |||| | ||
Sbjct 48549 GAATATTTGAATGTTGAGCTGTCTTGCTTCGGGAGAATCGAACGGC-AGTCTAAGGGCAA 48491
Query 65551 TAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGA 65610
|| || || || | ||||||||||||| ||| || |||| ||||| || |
Sbjct 48490 GGAAAGCATCAGCAAGGCCTTGAACACCAAGACCAATGGGTCGGTGTCTGAAGTT-GCTC 48432
Query 65611 TTTCA-GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACA 65669
|||| ||||| || | || || || || || || || || || || || || |
Sbjct 48431 TTTCTCGCTTCCGGGACGGGGTAGTAGTTGATCTCGATGATCTTGTTCAGGTTCTTAGTC 48372
Query 65670 ATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCTCATCTATT------AC- 65722
|| || | || || || | |||| | ||| ||| || | | || | | ||
Sbjct 48371 ATGACCTGGATGACCTCGTGCAGTCGGCCAAAGTCATATTGACCTTCGACTTGGTCAACG 48312
Query 65723 AAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATA 65782
||| ||| ||| |||||||| |||| ||| || ||||| ||||| | || | | ||
Sbjct 48311 AAAGATGG-CAAAGCAACAGAAGCCAAATTGCAGACGGCGACCTCGTCAGGGGCGGTGTA 48253
Query 65783 TTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACT 65842
| || || || ||||| | || |||||||||| || || || | ||||||||
Sbjct 48252 CTCAATGATTTCTGTGCACAAGTTGGAGGACTTGATGGTGCCCAAGTTCTTCTGATTACT 48193
Query 65843 CTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTC 65902
||| |||| || || ||||| || || |||||||| | ||||| ||| |||| | ||
Sbjct 48192 TTTTCTGTTGCAGGCGTCCTTGTAGAGCATGAATGGGTTTCCAGTCTCAGTCTGGGCCTC 48133
Query 65903 TATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATAGATTTGTATCT--CTT--TTCT 65957
| || || | ||| | | || | ||||| ||| | | | || ||| ||||
Sbjct 48132 CAAGATGGCATACCACAACTTCT-GTGCCTTGATTGTCTGTCGGCCTCGGCCTTCCTTCT 48074
Query 65958 CTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAAT---CCA 66014
| | | | | | ||| |||||||| || || | || ||| || ||
Sbjct 48073 CATACTTCTCGA----ACAGAGCCTCGAACTCCTCACCGTAG-CA--GTCAGATAAACCT 48021
Query 66015 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 66074
||| ||| | || || | | | ||| ||||||| | || || || ||||| ||
Sbjct 48020 GGAGCTTCGTTGGGGCAGAAGAGAGTCCAGTCTCCGTTTTTCTCAACCCGCTTCATGAAC 47961
Query 66075 AGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTA 66134
||||| ||| |||| ||||| ||| ||||| | | | | ||| || |||||
Sbjct 47960 AGATCTGGAGTCCAGAGAGCGTAAAACAAATCACGAGCACGAACTTCTTCCTTTCCGTGG 47901
Query 66135 TTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCC 66194
||||| || | || || | | | ||| ||||| || || | ||| | |||
Sbjct 47900 TTCTTCCGGAGGTTCAGCCACTCAAAGACATCGGCGTGCCAGGGCTCAAGGTAAACGGCA 47841
Query 66195 ATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 66254
| | ||||| | ||||| || ||||| || | ||||| ||| || || | | | |||
Sbjct 47840 AAGGCACCAGGTCTCTTGTTGCCGCCCTGGTCGACGTATCGAGCAGTATTGTCAAAGACT 47781
Query 66255 CTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTT 66314
| | ||| || | || || || ||||| || || || || | ||||||| ||| |
Sbjct 47780 CGGAGCATAGGGACAAGGCCGTTTGATGTGCCGTTTGTGCCTGCGATATAGGAGCCAGTC 47721
Query 66315 GCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCAT 66374
|| ||||| || | | || || || || || | || ||||| | |||||
Sbjct 47720 GCTCGAATTTTGTGGACGTTCAATCCAATACCGCCGGCATTCTTTGAGATCATGGCGCAG 47661
Query 66375 CGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAG 66434
|||| |||||| ||||| ||||| || || ||| |||||| | | |||||
Sbjct 47660 GTCTTTAGCGTATCGTAGATTCCCTCGATCGAGTCCTCCTTCATGTCGATCAAGAAACAT 47601
Query 66435 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 66494
|||||||| | || || ||||| || | ||| || |||||||| || |||
Sbjct 47600 GATGACATTTGAGCATTTGGTGTGCCTGCATTGAAGAGGGTGGGCGAAGCGTGTGTGAAC 47541
Query 66495 CATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATT 66554
|| | || | |||||||| |||||||| | || ||||| | ||||||
Sbjct 47540 ATCTTCTGGGACATGAGATTGTATGTCTCAATGACCTTCTCGATATCTTCTCCATGAATG 47481
Query 66555 CCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGAT--CTTGTTGTTTATTT 66612
|| || | || ||||| | ||||||||| |||||||| | || ||| |||| || |
Sbjct 47480 CCAACAGACACGCGCATCAGCATGTGCTGTGGTCTTTC--CCATGGCTTCTTGTC-ATAT 47424
Query 66613 TCAACAAG-TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGT 66671
| | ||| || ||| |||||| || || || |||||||||||||| ||| |||||
Sbjct 47423 TTGAGAAGATATGATCTTTCCAGTGTCTTGAAGCCAAAATAGTTGTAGTTAAAATCTCGG 47364
Query 66672 TCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATA 66731
||||| | ||| | |||||||| | || | | | || ||| ||| |
Sbjct 47363 TCGTATACAATGGCAGAGTTGAGCTCGTCGGCGTGCCTCATCAC-ACAGTCATAAGTCTC 47305
Query 66732 CTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTC 66790
||| || || ||||| || || | ||||| || ||||||||||||||| | | ||
Sbjct 47304 CTTGGAGATCATCGGCGAGTGCCTTCCATTCTTGGGATTGACATAGTTGTAGAGGTCTGT 47245
Query 66791 CATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGC 66850
|| ||| | || | || || || | ||||| ||||| || || || || | ||
Sbjct 47244 GATGACTGCCGAGAACTGCTTCTTCGTCTGCTTGTGAAGATTCGAGACTGCGATGCGGGC 47185
Query 66851 GGCTATAATGGCATAATCCGGATG 66874
|| | ||||| ||||| |||||
Sbjct 47184 AGCGAGGATGGCGTAATCTGGATG 47161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658171014706280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |