Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202
012-11-26] 217 sequences; 28,364,325 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq69 82.4 7e-11
>seq69
Length=644404
Score = 82.4 bits (90), Expect = 7e-11
Identities = 113/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 5597 TGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAACAGCACC 5656
|| || ||||| || ||| ||| ||||| | ||| ||| | ||||||||||| ||
Sbjct 381035 TGTGCGATTCGTTCTCCCTGCTTCACCTCATAGTCGGTGTCACTGAAGTTGAACAACAAT 381094
Query 5657 ACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGC 5716
|| || | || | ||||||||| || ||||| || ||||| ||||||||| |||
Sbjct 381095 ACTTTGACTTCTCCTCTGTAGTCGGCATCAATCACACCTGCGCCTGTGTCGATGAAATGC 381154
Query 5717 TTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTA 5754
|| ||| || || ||||| ||||| || || || ||
Sbjct 381155 TTTGACGCGAGTCCTGAGCGTGGAGCTACACGCCCATA 381192
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430053262640504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |