Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202 012-11-26] 217 sequences; 28,364,325 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq69 82.4 7e-11 >seq69 Length=644404 Score = 82.4 bits (90), Expect = 7e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 5597 TGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAACAGCACC 5656 || || ||||| || ||| ||| ||||| | ||| ||| | ||||||||||| || Sbjct 381035 TGTGCGATTCGTTCTCCCTGCTTCACCTCATAGTCGGTGTCACTGAAGTTGAACAACAAT 381094 Query 5657 ACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGC 5716 || || | || | ||||||||| || ||||| || ||||| ||||||||| ||| Sbjct 381095 ACTTTGACTTCTCCTCTGTAGTCGGCATCAATCACACCTGCGCCTGTGTCGATGAAATGC 381154 Query 5717 TTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTA 5754 || ||| || || ||||| ||||| || || || || Sbjct 381155 TTTGACGCGAGTCCTGAGCGTGGAGCTACACGCCCATA 381192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430053262640504