Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202
012-11-26] 217 sequences; 28,364,325 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq18 141 1e-29
seq19 134 2e-27
>seq18
Length=467604
Score = 141 bits (156), Expect = 1e-29
Identities = 191/264 (72%), Gaps = 4/264 (2%)
Strand=Plus/Minus
Query 16435 TAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCG 16494
|| |||||| ||||| | | ||||| |||||||| || || ||||||||||||||| |
Sbjct 181450 TATGCGTCA---CAGATTT-TGCGAGACAACATCCAGGGCATTACCAAGCCAGCTATCAG 181395
Query 16495 TCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCG 16554
||||| |||||||| ||||| ||||||||| |||| | || | ||||| |||| ||
Sbjct 181394 ACGTCTCGCTCGTCGAGGTGGTGTCAAGCGTATCTCCGCTATGATTTATGAGGAGACGCG 181335
Query 16555 TGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCA 16614
| || | |||| ||| | | | || |||| |||||| || || || || ||
Sbjct 181334 AGGCGTCCTCAAGACCTTTTTAGAATCAGTCATCCGAGATGCTGTCACATACACAGAACA 181275
Query 16615 CGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCG 16674
||| || | ||||| || || || | || | |||||||| ||||||| ||||||||
Sbjct 181274 CGCAAAGAGAAAGACCGTTACATCTCTTGACGTTGTCTATGCTCTGAAACGACAAGGCCG 181215
Query 16675 TAAGATTTATGGTTTTGGAAGTTA 16698
| | | |||||||| || ||||
Sbjct 181214 AACGCTGTATGGTTTCGGTGGTTA 181191
>seq19
Length=499595
Score = 134 bits (148), Expect = 2e-27
Identities = 183/254 (72%), Gaps = 1/254 (0%)
Strand=Plus/Plus
Query 16446 GCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTC 16505
|||||| ||||||||| ||||| || || ||||| || || || ||||| ||||||||||
Sbjct 462832 GCAGAT-TCTTCGAGACAACATTCAGGGCATCACAAAACCCGCCATCCGACGTCTGGCTC 462890
Query 16506 GTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGA 16565
|||| || || ||||||||| |||| | || |||| ||||||| || | || | |
Sbjct 462891 GTCGAGGAGGTGTCAAGCGTATCTCGGCGATGATCTACGAAGAGACACGAGGCGTCCTCA 462950
Query 16566 AGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTA 16625
| |||||| || |||| |||| || ||| || || || || ||||| || | |
Sbjct 462951 AATCCTTCCTTGAGTCCGTCATCCGAGACGCTGTCACATACACGGAACACGCCAAGAGAA 463010
Query 16626 AGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATG 16685
|||| ||||| || |||| |||||||||| | || | ||||| || | | || |
Sbjct 463011 AGACCGTCACATCTCTGGACGTCGTCTATGCTCTCAAGAGACAAGGACGAACTCTCTACG 463070
Query 16686 GTTTTGGAAGTTAA 16699
|||| || |||||
Sbjct 463071 GTTTCGGTGGTTAA 463084
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075001595381
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |