Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202
012-11-26] 217 sequences; 28,364,325 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq85 174 2e-38
>seq85
Length=245923
Score = 174 bits (192), Expect = 2e-38
Identities = 370/549 (67%), Gaps = 9/549 (2%)
Strand=Plus/Plus
Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150
||||||||||||||| || | || ||||| || || || | || ||| ||| || |
Sbjct 84441 GCACGCAAAGTCGGTGTGCATGCCCTCGTCCCGGGAGATAAGTTCGTTGGAGAAGGTAAG 84500
Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210
|| || | || ||||| ||||||||||| || || || || || || || || ||
Sbjct 84501 GCCGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAA 84560
Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAAT-TACTGC 93269
||||||||||| || ||||| || || | ||| | |||||| | ||| | | |
Sbjct 84561 GATACCTTCCACAGCGGCAAAGGCGACCAGACGCTGGGCAAA---GGTGGACTCTCGATC 84617
Query 93270 TG--ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327
|| ||||| | |||||| || ||||| || |||| ||||| | ||| ||||| ||
Sbjct 84618 TGAAATCCAGCGGAGAGCCCATTCAGCTTTCTTTCTAATGCAAGGAATTGTATCGATGGC 84677
Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387
|| || ||||| | || | | | ||| |||||||| || || | || || ||
Sbjct 84678 GTCGAAGAGGTATTGTCTTTGCTTTGGCTCTTTAATGTATGTGTCAATGAGAAGTGAGTA 84737
Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447
|||||| |||| || ||||| || ||||| || || || || | ||||| |
Sbjct 84738 CATTTCGCTGTGGATGTTTTCCATCATGATCTGGAAGCCATAAAAGCAGCGGGCTTCGGG 84797
Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507
|| || ||||| || || | ||| || || || || ||||| || || || || ||
Sbjct 84798 GACTTGGACTTCGCCGGAGAAGCGCTCGACAAGGTTCTCGTTGACGATGCCGTCCGAGGC 84857
Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTT---ATC 93564
|| || ||||| | | || | || | || ||||| || ||||| |
Sbjct 84858 GGCGAAGAAAGCGAGGACGTGGGAAACGAAGTAACGTTCGTCATCGTTGAGCTTGTGGTG 84917
Query 93565 CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624
||| ||| |||||||| || || |||||||||||| | ||||| || || ||||| ||
Sbjct 84918 CCAGTCGTGGAGATCTTTCGACAGGTCGACTTCTTCGGCGGTCCAGAAGGAGGCTTCGGC 84977
Query 93625 TTTTTTGTA 93633
||| |||||
Sbjct 84978 TTTCTTGTA 84986
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556859289515080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |