Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202
012-11-26] 217 sequences; 28,364,325 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq123 233 2e-56
seq85 113 5e-20
>seq123
Length=109856
Score = 233 bits (258), Expect = 2e-56
Identities = 909/1407 (65%), Gaps = 45/1407 (3%)
Strand=Plus/Minus
Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001
||||| |||| || |||||||| ||||| ||||| || ||||| || || | || |||
Sbjct 48827 TAGATGTTGGATGTATATGGCTCGAAGCATTCATTATTGCCCAATATCTGCGACGTAGAG 48768
Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061
|| || ||||||||||| | ||||| || || | ||| | | ||| |
Sbjct 48767 GCGGTCGGCATGGGTGCGACAAGAAGAGAATTTCGAACACCATACTGAGCAATCTTGGCT 48708
Query 114062 TTGAGGGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGA 114119
|| | ||| |||||||| | | | | || || || | ||| | || |||| |
Sbjct 48707 TTCAAGGCCTCCCAGTCCCAAAGGTCTG-TTGGTGTCAGACC-CCAGAGGTCGTACTGTA 48650
Query 114120 GGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCA 114179
| |||||| || ||||| |||||| | || |||||||| || ||| ||| |
Sbjct 48649 GCTGACCTTGAGAAATGGGCGAGCCCTCATAGGTTTCGTATGGACCAAGTTCCTTCGCAA 48590
Query 114180 ATTC----GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTC 114235
|| | |||| | || |||||||| || || ||||| || || || ||
Sbjct 48589 GGTCACATGAAGCTGTC----AGAGCTGCGTGGTAGATAGTCTCGAATATTTGAATGTTG 48534
Query 114236 AT-TGCCTTGGCCTCGTCGGAATCAAACGCGAGTC----GGCACAAAATAAATACATCCG 114290
| || |||| | ||| ||||| |||| |||| |||| | || |||| |
Sbjct 48533 AGCTGTCTTG-CTTCGGGAGAATCGAACGGCAGTCTAAGGGCA----AGGAAAGCATCAG 48479
Query 114291 CGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCT 114350
| || ||||| ||||| || ||||| || || ||||| | || ||||| || |
Sbjct 48478 CAAGGCCTTGAACACCAAGACCAATGGGTCGGTGTCTGAAGTTGCTCTTTCTCGCTTCCG 48419
Query 114351 CCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGA 114410
||||| || | || | ||||| | | | || || || || || | |||| |||
Sbjct 48418 GGACGGGGTAGTAGTTGATCTCGATGATCTTGTTCAGGTTCTTAGTCATGACCTGGATGA 48359
Query 114411 TTTCATGAAGCTTTTCGTAATCAAAA----CTGCGAGTCTCTTCATTGACATACTTAGGA 114466
|| || || | | ||| | || ||| | | ||| || | | ||
Sbjct 48358 CCTCGTGCAGTCGGCCAAAGTCATATTGACCTTCGACT-TGGTCAACGAAAGAT---GGC 48303
Query 114467 AGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATT 114526
| || | || |||| ||| || || | | ||| || | |||||||| || |||
Sbjct 48302 AAAGCAACAGAAGCCAAATTGCAGACGGCGACCTCGTCAGGGGCGGTGTACTCAATGATT 48243
Query 114527 TCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA 114586
|| || ||||| || || ||| ||||||||||||||||| ||||| ||| ||||
Sbjct 48242 TCTGTGCACAAGTTGGAGGACTTGATGGTGCCCAAGTTCTTCTGATTACTTTTTCTGTTG 48183
Query 114587 CACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 114646
|| || |||||||| |||||| |||| | || ||||| || |||| || | || ||
Sbjct 48182 CAGGCGTCCTTGTAGAGCATGAATGGGTTTCCAGTCTCAGTCTGGGCCTCCAAGATGGCA 48123
Query 114647 TTCCA-GACATCGGCGGCTGGCACAGTGGC-GTTGG-CTCGCCCCTCCTCCTCGTACTTT 114703
| ||| || || | | || | | || | || || |||| || |||| ||| |||||
Sbjct 48122 TACCACAACTTCTGTGCCTTG---ATTGTCTGTCGGCCTCGGCCTTCCTTCTCATACTTC 48066
Query 114704 GTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG 114763
| | || || || ||||| ||||| | || || | ||||| || | | |||
Sbjct 48065 TCGAACAGAGCCTCGAACTCCTCACCGTAGCAGTCAGATAAACCTGGAGCTTCGTTGGGG 48006
Query 114764 CAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAG 114823
|||||||||| ||| | || | |||||| ||||||||||| || ||||| |||||
Sbjct 48005 CAGAAGAGAGTCCAGTCTCCGTTTTTCTCAACCCGCTTCATGAACAGATCTGGAGTCCAG 47946
Query 114824 AGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 114883
||||| | || | ||| ||| ||| ||||||| | || || || || | | |
Sbjct 47945 AGAGCGTAAAACAAATCACGAGCACGAACTTCTTCCTTTCCGTGGTTCTTCCGGAGGTTC 47886
Query 114884 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTT 114939
| | || | || ||| |||||||| || || ||||| || || | | ||| ||
Sbjct 47885 AGCCACTCAAAGACATCGGCGTGCCAGGGCTCAAGGTAAACGGCAAAGGCACCAGGTCTC 47826
Query 114940 ACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAAT 114999
| | || |||||| || || | || || | ||| || || ||||| || |
Sbjct 47825 TTGTTG-CCGCCCTGGTCGACGTATCGAGCAGTATTGTCAAAGACTCGGAGCATAGGGAC 47767
Query 115000 GATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCA 115057
| || | ||| ||| ||||| || ||| ||| ||| | | | |||| | |
Sbjct 47766 AAGGCCGTTTGATGTGCCGTTTGTGCCTGCGATATAGGAGCC--AGTCGCTCGAATTTTG 47709
Query 115058 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTG 115117
|||| || || |||||||| || || ||||||||| ||||| | | || |
Sbjct 47708 TGGACGTTCAATCCAATACCGCCGGCATTCTTTGAGATCATGGCGCAGGTCTTTAGCGTA 47649
Query 115118 CCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGT 115177
||||||| || ||||||||||| |||| | |||| | ||| || ||||||||
Sbjct 47648 TCGTAGATTCCCTCGATCGAGTCCTCCTTCATGTCGATCAAGAAACATGATGACATTTGA 47589
Query 115178 GGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGAC 115237
| ||||||| || || ||||||||||| || | ||||| ||||||| ||||||
Sbjct 47588 GCATTTGGTGTGCCTGCATTGAAGAGGGTGGGCGAAGCGTGTGTGAACATCTTCTGGGAC 47529
Query 115238 ATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACC 115297
|| || ||| ||||| | ||| || ||||| || ||||| || | || ||
Sbjct 47528 ATGAGATTGTATGTCTCAATGACCTTCTCGATATCTTCTCCATGAATGCCAACAGACACG 47469
Query 115298 CGCATAAACATGTATTGGGGTGTTTCC 115324
||||| | ||||| || ||| |||||
Sbjct 47468 CGCATCAGCATGTGCTGTGGTCTTTCC 47442
>seq85
Length=245923
Score = 113 bits (124), Expect = 5e-20
Identities = 216/312 (69%), Gaps = 10/312 (3%)
Strand=Plus/Plus
Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106
||||| || ||| | |||||||| |||||||| ||||| || |||||| || ||
Sbjct 84445 GCAAAGTCGGTGTGCATGCCCTCGTCCCGGGAGATAAGTTCGTTGGAGAAGGTAAGGCCG 84504
Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166
||||||||||| |||||||| | |||||| || | || || || |||||||||||
Sbjct 84505 GGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAGATA 84564
Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC---A 126223
|| |||||| || || || | ||||||| ||||||| | |||| | || |
Sbjct 84565 CCTTCCACAGCGGCAAAGGCGACCAGACGCTGGGCAAAGGTG---GACTCTCGATCTGAA 84621
Query 126224 AACCACTTCATCGCCCACTGCGCCTT-TTTCTCGATACACGGGACGGTCTGGATCGCTTC 126282
| ||| | ||||| | || || ||||| || || || | || | ||| || ||
Sbjct 84622 ATCCAGCGGAGAGCCCATTCAGCTTTCTTTCT-AATGCAAGGAATTGTATCGATGGCGTC 84680
Query 126283 AAAGAGTTCCT-TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATG 126341
||||| | | ||||| || ||| ||||| ||||| | || ||||| ||| ||
Sbjct 84681 GAAGAGGTATTGTCTTTGCT-TTGGCTCTTTAATGTATGTGTCAATGAGAAGTGAGTACA 84739
Query 126342 TTTCGCCGTGGA 126353
|||||| |||||
Sbjct 84740 TTTCGCTGTGGA 84751
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597351979678360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |