Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202
012-11-26] 217 sequences; 28,364,325 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq1 104 3e-17
>seq1
Length=402072
Score = 104 bits (114), Expect = 3e-17
Identities = 186/272 (68%), Gaps = 0/272 (0%)
Strand=Plus/Minus
Query 153768 CAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 153827
|| ||||||||| | || | ||||| ||||| ||||||||||| || || || |
Sbjct 149325 CAGAGGTTTGGTGTGCCGCTCGGATACGGAGGACCTCATGCTGCCTTTTTCGCCTGCAGT 149266
Query 153828 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGT 153887
|| || |||||||||| || ||||| | | || ||| ||| ||| | |||
Sbjct 149265 GAACAGCATAAGAGAAAAATCCCTGGACGGCTCGTTGGTGTTTCAAAAGACCGACTAGGA 149206
Query 153888 AATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCA 153947
|| ||||| | || | || | || ||| | |||||||| ||| | | || || ||
Sbjct 149205 AACAAAGCTGTCCGACTTGCGTTGCAAACTCGGGAGCAGCACATCCGTCGCGAAAAGGCT 149146
Query 153948 ACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCAGCA 154007
|| |||||||||||| ||||| || ||||| || || ||| | | |||||||
Sbjct 149145 ACTTCTAACATCTGCACCGCTCAAGCTCTGCTTGCCAACATGGCAGCGCTCTATGCGATC 149086
Query 154008 TATCATGGTGCAGATGGACTACATGCTATAGC 154039
|| || ||| ||| ||||| || ||||| ||
Sbjct 149085 TACCACGGTCCAGGGGGACTGCAAGCTATTGC 149054
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579211228885280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |