Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202
012-11-26] 217 sequences; 28,364,325 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq1 116 4e-21
>seq1
Length=402072
Score = 116 bits (128), Expect = 4e-21
Identities = 202/294 (69%), Gaps = 0/294 (0%)
Strand=Plus/Minus
Query 158421 TGACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCA 158480
|||||| ||| | || || || ||||||||| | || | ||||||||||| |||||
Sbjct 149347 TGACATCGCTTTTGGAAGCGCTCAGAGGTTTGGTGTGCCGCTCGGATACGGAGGACCTCA 149288
Query 158481 TGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG 158540
|||||| || || || | || || |||||||||| || ||||| | | || ||
Sbjct 149287 TGCTGCCTTTTTCGCCTGCAGTGAACAGCATAAGAGAAAAATCCCTGGACGGCTCGTTGG 149228
Query 158541 TCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCA 158600
| ||| ||| | ||| || ||||| | || | || | || ||| | |||||
Sbjct 149227 TGTTTCAAAAGACCGACTAGGAAACAAAGCTGTCCGACTTGCGTTGCAAACTCGGGAGCA 149168
Query 158601 GCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAA 158660
||| ||| | | || || || || |||||||||||| || ||||| ||||| || ||
Sbjct 149167 GCACATCCGTCGCGAAAAGGCTACTTCTAACATCTGCACCGCTCAAGCTCTGCTTGCCAA 149108
Query 158661 TATGTCTGGGTTCTATGCAGCATATCATGGTGCAGATGGACTACATGCTATAGC 158714
||| | | | ||||||| || || ||| ||| ||||| || ||||| ||
Sbjct 149107 CATGGCAGCGCTCTATGCGATCTACCACGGTCCAGGGGGACTGCAAGCTATTGC 149054
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588049604911120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |