Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202 012-11-26] 217 sequences; 28,364,325 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq154 123 2e-23 >seq154 Length=71981 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 101255 CGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCA 101314 |||| ||||| ||||| || ||||| || || ||||||||||| | ||||| | | Sbjct 41232 CGTAGAACTAGGTGAAGAGTCGATTCCTTCTGGATATTGTAATCACTCAAAGTTCGGCCG 41173 Query 101315 TCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTA 101374 || |||| ||||||||| ||||| || | ||||| || ||||| ||||| || || ||| Sbjct 41172 TCTTCCAGTTGCTTACCAGCAAAGATGAGTCGCTGCTGGTCGGGAGGAATACCCTCCTTA 41113 Query 101375 TCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACC 101434 || || ||||| || ||| | || | || || || | || || || ||||||| Sbjct 41112 TCCTGGATTTTGCTCTTGACATTGTCGATGGTATCGGAAGACTCAACCTCGAGAGTGATT 41053 Query 101435 GTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || || || || || || ||||| ||||||||| Sbjct 41052 GTCTTACCAGTCAATGTCTTCACAAAAATCTGCATG 41017 Score = 93.3 bits (102), Expect = 3e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| || || || ||| || || || || |||||||| | | ||| | | || || Sbjct 41683 AACCAAGTGCAGTGTACTCTCCTTCTGAATGTTGTAATCAGAAAGAGTACGACCGTCCTC 41624 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 ||||||||| || ||||| |||| || || ||||| |||||||| || || || || || Sbjct 41623 CAATTGCTTTCCGGCAAAGATCAGTCGTTGCTGATCCGGCGGAATACCCTCCTTGTCCTG 41564 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 || || |||||| | || | ||||||||| | || || || | || | || || Sbjct 41563 GATCTTGGACTTTACATTGTCGATAGTGTCAGAGCTCTCAACCTCCAAGGTAATTGTCTT 41504 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 |||||| | || || || || || |||||| Sbjct 41503 GCCGGTGAGTGTCTTCACGAAAATTTGCATG 41473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396277351967469