Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202
012-11-26] 217 sequences; 28,364,325 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq154 136 3e-27
>seq154
Length=71981
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598
|||||||| || || | ||||| || || || ||||| || ||||| |||||||||||
Sbjct 41701 GCCGCCCCGAAGTCGGAGAACCAAGTGCAGTGTACTCTCCTTCTGAATGTTGTAATCAGA 41642
Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658
||| | ||| |||| ||||| ||||| |||||||| |||||||| || ||||||| ||
Sbjct 41641 AAGAGTACGACCGTCCTCCAATTGCTTTCCGGCAAAGATCAGTCGTTGCTGATCCGGCGG 41582
Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718
|| ||||||||||| ||||| |||||| | | || || || ||| ||
Sbjct 41581 AATACCCTCCTTGTCCTGGATCTTGGACTTTACATTGTCGATAGTGTCAGAGCTCTCAAC 41522
Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||| ||||| || || || || | || || || ||||| |||||
Sbjct 41521 CTCCAAGGTAATTGTCTTGCCGGTGAGTGTCTTCACGAAAATTTGCAT 41474
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635
|| || || |||||||||||| | | |||| |||| |||| |||||||| |||||
Sbjct 41208 TCCTTCTGGATATTGTAATCACTCAAAGTTCGGCCGTCTTCCAGTTGCTTACCAGCAAAG 41149
Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695
|| |||||||| || || | |||| |||||||| || || || || |||
Sbjct 41148 ATGAGTCGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGGATTTTGCTCTTGACATTG 41089
Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755
| | | || || | ||| ||||| | || || || || || ||||| || || |||
Sbjct 41088 TCGATGGTATCGGAAGACTCAACCTCGAGAGTGATTGTCTTACCAGTCAATGTCTTCACA 41029
Query 48756 AAAATCTGCAT 48766
|||||||||||
Sbjct 41028 AAAATCTGCAT 41018
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380936592539091
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |