Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202
012-11-26] 217 sequences; 28,364,325 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq85 223 6e-53
seq123 123 5e-23
>seq85
Length=245923
Score = 223 bits (246), Expect = 6e-53
Identities = 565/848 (67%), Gaps = 30/848 (4%)
Strand=Plus/Plus
Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899
|||||||| ||||||| ||||| ||||| || ||||| ||| | | ||||||||||||
Sbjct 84154 TGGTAGTCACCCACTCGCTTCTCGAAGAAATTGGTCTTGCCCGCTAGAGAGATGTTCTCC 84213
Query 47900 ATGAAGAGGAAGGGGTTGGGTG----TGTTATACACCCGTGTCAGGCCCATCTGTTCCAG 47955
|| ||| || || |||| || ||| ||| | | || | ||||| | |||
Sbjct 84214 ATAAAGTCAAACGGATTGG-TGACCTTGTAGTACTTCGG-GTTA--CCCATACTTACCAA 84269
Query 47956 CAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAG 48015
||| | || || ||| |||| ||||| | |||||| | ||||||||| | ||
Sbjct 84270 CAGCCGGTCGGCAACGAACTCAATGTACTGCTTCATGAGCTTCGAGTTCATGCCCAGTAG 84329
Query 48016 GGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAAT 48075
| ||||| | |||| ||||| || || | ||| ||||| ||||| || | | ||
Sbjct 84330 AGCAACGGGGAGCGCCTCGGTGAGGAATTCTTGCTCGATCTGGACGGCCTCGACGATGAT 84389
Query 48076 ---CTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAG-AGCATGC 48131
||| ||| | || |||||| || | |||||| | || |||| ||
Sbjct 84390 GGCCTGGATAA---GTTCCTTTGAGGGGCGGTGGTTAAGGTGCGAG----AGCAGCAGGC 84442
Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191
| |||||||| |||||| ||| ||||||||| ||| || ||||||||||| || |
Sbjct 84443 ACGCAAAGTCGGTGTGCATGCCCTCGTCCCGGGAGATAAGTTCGTTGGAGAAGGTAAGGC 84502
Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251
| ||||||| || | || ||||||||||| || | ||||| ||||| ||||||||||
Sbjct 84503 CGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAGA 84562
Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTG-TCTGAG 48310
| || ||||| || || || ||| || | || | |||| | ||| | |||||
Sbjct 84563 TACCTTCCACAGCGGCAAAGGCGACCAGACGCTGGGC-AAAGGTGGACTCTCGATCTGAA 84621
Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGG 48370
|||||| || ||||| || || ||||| | ||||| || || || || ||||| |
Sbjct 84622 ATCCAGCGGAGAGCCCATTCAGCTTTCTTTCTAATGCAAGGAATTGTATCGATGGCGTCG 84681
Query 48371 AAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTAC 48427
||||| | | | | || || || || || | |||| || || ||||
Sbjct 84682 AAGAGGTATTGTCTTTGCTTTGGCTCTTTAATGTATGTGTCAATGAGAAG---TGAGTAC 84738
Query 48428 ATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAAC 48487
|| || ||| | || || || ||||||||| || || ||| | ||| ||
Sbjct 84739 ATTTCGCTGTGGATGTTTTCCATCATGATCTGGAAGCCATAAAAGCAGCGGGCTTCGGGG 84798
Query 48488 ACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCA 48547
|| || ||||| |||||| | ||| | || ||||| ||||| || || || || ||
Sbjct 84799 ACTTGGACTTCGCCGGAGAAGCGCTCGACAAGGTTCTCGTTGACGATGCCGTCCGAGGCG 84858
Query 48548 GCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAG---AGCATTC 48604
|| ||||| || ||||| || || ||| | || |||| | | |||| | |
Sbjct 84859 GCGAAGAAAGCGAGGACGTGGGAAACGAAGTAACGTTCGTCATCGTTGAGCTTGTGGTGC 84918
Query 48605 CAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCT 48664
||| | || | ||||| |||||| |||||||| | ||||||||||| || |||
Sbjct 84919 CAGTCGTGGAGATCTTTCGACAGGTCGACTTCTTCGGCGGTCCAGAAGGAGGCTTCGGCT 84978
Query 48665 TTTTTGTA 48672
|| |||||
Sbjct 84979 TTCTTGTA 84986
>seq123
Length=109856
Score = 123 bits (136), Expect = 5e-23
Identities = 1009/1603 (63%), Gaps = 86/1603 (5%)
Strand=Plus/Minus
Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612
|| || || || | ||| ||| ||||||| |||| || |||||||||||||| |||||
Sbjct 49208 ACGGTGAATTGGATTGGCGCAGAAGCAGCCATGGTTCGAAGATAGTACATGCCAGTCTTG 49149
Query 212613 AGGCCCTTGCCCCAGCCGTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTCTGG 212672
|| ||| | |||||| | |||||| | |||| |||| | | | |||
Sbjct 49148 AGACCCATTTTCCAGCCAGCGAAGTGCATAGAAGTGA---TCTTGCCCATGGT----TGG 49096
Query 212673 TCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTG 212732
| |||| |||||| | ||||| ||||| ||| || ||||| | | |
Sbjct 49095 T--TCCTT------CAGATGAATGTTCAACGACTGTGACTGATCAATGAAGGCACCTCGA 49044
Query 212733 TCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCT 212792
||||||||||| | |||||| |||||| |||| |||||| || |||||| ||| | ||
Sbjct 49043 TCAGCGGCCATCTGGATGATAGTTCTCTGAGAGATCTCCCAGACAGTCTTGTAGAGTGCT 48984
Query 212793 TTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCC--CCTGTGTA-TGGTCAGC 212849
|||| ||| ||| | | || | |||||| | || || ||| | | || |
Sbjct 48983 TTGATGTCGGTTGGAATGTTTGGTACGTTCTGAATTGAACCGCCCTCGGCAATGATTCTG 48924
Query 212850 TGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTT-GACCAGGTGAGG 212908
| | ||||| || ||| ||||| | || | | ||| || ||| ||
Sbjct 48923 TTCTT---CATGTTGTCCGACCACAGGCCAA-GATCAACGAGATCTTTGAGCAGCCATGG 48868
Query 212909 GTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGG 212968
||||| | ||| || || |||| | ||| | | ||| | ||| || || || ||
Sbjct 48867 ATTGACGACCTGAAATTCGCCTGCTAACACACGACGGGAGTAGATGTTGGATGTATATGG 48808
Query 212969 CTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCAC 213028
||||| || || || || |||| ||||| | || ||| || |||||||| || ||
Sbjct 48807 CTCGAAGCATTCATTATTGCCCAATATCTGCGACGTAGAGGCGGTCGGCATGGGTGCGAC 48748
Query 213029 CAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGA-GGCGCCGAAGCTCTGCCCAGTCCC 213087
|| ||| || | || || | || | || ||| ||| || |||||||||
Sbjct 48747 AAGAAGAGAATTTCGAACACCATACTGAGCAATCTTGGCTTTCAAGGCCT-CCCAGTCCC 48689
Query 213088 ATCTGCCAGACAGGTCCTCGTCCT-TCACGTTCCACATGTCAAACTGCAAGATGCCTTTG 213146
| ||||| | | | ||| ||| | ||| |||| | | || | |||
Sbjct 48688 AA---------AGGTC-TGTTGGTGTCAGACCCCAGAGGTCGTACTGTA-GCTGACCTTG 48640
Query 213147 CTCACGGGGCT-GCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGA 213205
| |||| ||||| || | ||| || ||| | ||||| || || || || ||
Sbjct 48639 AGAAATGGGCGAGCCCTCATAGGTTTCGTATGGACCAAGTTCCTTCGCAAGGTCACATGA 48580
Query 213206 CGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCT-TCTTGGCCT 213264
|| ||| || |||| |||||| || || ||||| | ||||||||| ||||| | |
Sbjct 48579 AGCTGTCAGAGCTGCGTGGTAGATAGTCTCGAATATTTGAATGTTGAGCTGTCTTG-CTT 48521
Query 213265 CTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324
| || || ||| |||| | | | |||| ||||||| || || || || || |
Sbjct 48520 CGGGAGAATCGAACGGCAGTCTAAGGGCAAGGAAAGCATCAGCAAGGCCTTGAACACCAA 48461
Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCC---AAGGGGTAAAAGT 213381
|| ||||||| |||||| | ||| ||| | | | ||| | |||||| |||
Sbjct 48460 GACCAATGGGTCGGTGTCTGAAGTTGCTCTTT---CTCGCTTCCGGGACGGGGTAGTAGT 48404
Query 213382 TGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGT--- 213438
|| |||||||||||||| ||||| || || | | |||| | | |||
Sbjct 48403 TGATCTCGATGATCTTGTTCAGGTTCTTAGTCATGACCTGGATGACCTCGTGCAGTCGGC 48344
Query 213439 ---ACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGG 213495
| || | ||||| | | | | ||| || || |||| || | |
Sbjct 48343 CAAAGTCAT-ATTGACCT--TCGACTTGGTCA---ACGAAAGATGGCAAAGCAACAGAAG 48290
Query 213496 CCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGT 213555
||| ||||| ||||| ||||| | || | | |||||||| ||||| || ||||||| ||
Sbjct 48289 CCAAATTGCAGACGGCGACCTCGTCAGGGGCGGTGTACTCAATGATTTCTGTGCACAAGT 48230
Query 213556 TGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGT 213615
|| | | ||||||||||| ||||| || || ||| |||| | |||||||
Sbjct 48229 TGGAGGACTTGATGGTGCCCAAGTTCTTCTGATTACTTTTTCTGTTGCAGGCGTCCTTGT 48170
Query 213616 AGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGTA 213673
|||||||| | ||| || ||||| ||||| | ||| | |||| ||| | |
Sbjct 48169 AGAGCATGAATGGGTTTCCAGTCTCAGTCTGGGCCTCCA--AGATGGCATACCACAACTT 48112
Query 213674 CCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGT-AGCCTCGTACTGTTCGTAGAGCT 213732
| ||||||| | ||| | || ||| | | ||| |||| ||| | ||
Sbjct 48111 CTGTGCCTTGA----TTGTCTGTCGGCCTCGGCCTTCCTTCTCATACTTCTCGAACAGAG 48056
Query 213733 CGTTGAATTCGTGGCCCCAGACCCTGTC---CAGTCCCGGACAGGATGC---GGGACACA 213786
| | ||| || | || || | ||| | || ||| | | | ||| || |
Sbjct 48055 CCTCGAACTCCTCACCGTAG---CAGTCAGATAAACCTGGA---GCTTCGTTGGGGCAGA 48002
Query 213787 TGAGGCTCCAGTCCCCG-TCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGC 213845
||| ||||||| ||| | |||| || | || ||||||||| || || ||| ||
Sbjct 48001 AGAGAGTCCAGTCTCCGTTTTTCTC-AACCCGCTTCATGAACAGATCTGGAGTCCAGAGA 47943
Query 213846 GCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGA 213905
||| |||| || | | | || ||| ||| ||| || || || | ||
Sbjct 47942 GCGTAAAACAAATCACGAGCACGAACTTCTTCCTTTCCGTGGTTCTTCCGGAGGTTCAGC 47883
Query 213906 AAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTC--- 213962
| ||||||| || |||||||| ||||| | ||| | ||||||||| || || |||
Sbjct 47882 CACTCAAAGACATCGGCGTGCCAGGGCTCAAGGTAAACGGCAAAGGCACCAGGTCTCTTG 47823
Query 213963 TTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGC 214022
|||||||||||||| || | || ||| |||| || || | || || ||
Sbjct 47822 TTGCCGCCCTGGTCGACGTATCGAGCAGTATTGTCAAAGACTCGGAGCATAGGGACAAGG 47763
Query 214023 CCGTTGGACTGT-CCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCAT 214081
||||| || ||| ||||| || || || ||||| ||||| | || | | ||| |
Sbjct 47762 CCGTTTGA-TGTGCCGTTTGTGCCTGCGATATAGGAGCCAGTCGCTCGAATTTTGTGGAC 47704
Query 214082 GGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAG 214124
| | || || || ||||| | ||| |||||||||||||||
Sbjct 47703 GTTCAATCCAATACCGCCGGCATTCTTTGAGATCATGGCGCAG 47661
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931530273217280
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