Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herpotrichiellaceae_20sp._20UM238_20[genbank_20GCA_5F000315175.1_202
012-11-26] 217 sequences; 28,364,325 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq154 122 6e-22
>seq154
Length=71981
Score = 122 bits (134), Expect = 6e-22
Identities = 160/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611
||||| ||||| || | || |||||||| || || || || ||||||| |||||
Sbjct 41694 CGAAGTCGGAGAACCAAGTGCAGTGTACTCTCCTTCTGAATGTTGTAATCAGAAAGAGTA 41635
Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671
| || || | ||||||||| ||||| || || ||||| ||||| || ||||| ||
Sbjct 41634 CGACCGTCCTCCAATTGCTTTCCGGCAAAGATCAGTCGTTGCTGATCCGGCGGAATACCC 41575
Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAG 480730
|||||||| || ||||| || ||| || ||||| |||| | | | || | ||||
Sbjct 41574 TCCTTGTCCTGGATCTTGGACTTTACATTGTCGATAGTGTCAGAGCTCTCAACCTCCAAG 41515
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| |||| || || |||||||| ||||| |||||||||||
Sbjct 41514 G-TAATTGTCTTGCCGGTGAGTGTCTTCACGAAAATTTG 41477
Score = 113 bits (124), Expect = 3e-19
Identities = 116/152 (76%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677
|||||||| ||||| ||||| ||||| |||||||| || ||||||||||| || ||||||
Sbjct 40944 TCTTCAAGCTGCTTACCAGCGAAAATCAGACGTTGCTGGTCAGGAGGAATGCCCTCCTTG 40885
Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATA 480737
||||||||||| |||||| || || || ||| || | |||||||| ||
Sbjct 40884 TCTTGAATCTTGCTCTTGACATTGTCGATCGTGTCACTGGATTCGACCTCAAGGGTGATG 40825
Query 480738 GTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || || || |||||||| ||||| || ||
Sbjct 40824 GTCTTGCCAGTCAGAGTCTTGACGAAGATCTG 40793
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268169891817116
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |